Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01483 ATGCAAAGTCACTCTTTCTCCTACATATCCTCTAGTGGGAGTACTGCCTACTTAGAAGCGGATAATGAAGATGATGAAGAGTTCATCTCTCTCTCTCTTGGCCTTCCTGGCCAACACAGCAGCAACCCTAACTCCTCTTCCTCCTCAATTCACTCTTCAGCAAATCTGCACCACCACTTATACCACCACCACCACCACCCAAACCCTACATCTGATGAACAAAATGGTGTAACTGTGGCACTCCATATTGGCCTTCCCACCACTGCACCAACCACCTCTTCTGCACAACCTCAATTGCCCCCTCCTCAATACTGGATCCCTTCCCCAGCCCAAATCCTCATTGGACCCACCCAGTTCTCATGTACAGTCTGCAACAAAACATTCAATCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGTTCACAGTATAGGAAAGGGCCTGAATCATTGCGTGGGACAAAGCCAGCTTCTTCAATGCTGAGACTTCCATGCTATTGCTGTGCAGAGGGTTGCAAGAACAACATAGAGCATCCAAGGTCAAGACCACTCAAGGATTTCAGGACCCTCCAAACACACTACAAGAGAAAGCATGGAGCCAAGCCTTTTGGATGCAGAAAGTGTGGGAAGCCATTTGCTGTGCGAGGAGATTGGAGGACACATGAGAAAAATTGTGGGAAGTTATGGTTTTGCATCTGTGGTTCTGATTTCAAGCACAAGAGGTCTCTTAAGGACCATGTTCGCGCTTTCGGGGACGGCCATGCCCCACACACTGTGGAGAGCTGTGGTCAAATGGGAGAAGAAGATGAAGAAGAAGAAGAAGAAGTAGATGAAGATGATATTGAAGATGATGATGATGATGATAACAACAGTGAAGTGGTAGTTTATGGGAATCATCATGGATCAAGTACTCTTGGGTCTATTTACTTTTAA 936 0.4626 MQSHSFSYISSSGSTAYLEADNEDDEEFISLSLGLPGQHSSNPNSSSSSIHSSANLHHHLYHHHHHPNPTSDEQNGVTVALHIGLPTTAPTTSSAQPQLPPPQYWIPSPAQILIGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCGQMGEEDEEEEEEVDEDDIEDDDDDDNNSEVVVYGNHHGSSTLGSIYF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01483 311 MobiDBLite consensus disorder prediction 255 311 - -
Bach4g01483 311 SMART c2h2final6 204 224 IPR013087 -
Bach4g01483 311 SMART c2h2final6 119 141 IPR013087 -
Bach4g01483 311 SMART c2h2final6 167 199 IPR013087 -
Bach4g01483 311 MobiDBLite consensus disorder prediction 296 311 - -
Bach4g01483 311 MobiDBLite consensus disorder prediction 266 292 - -
Bach4g01483 311 Gene3D Classic Zinc Finger 118 141 - -
Bach4g01483 311 Gene3D Classic Zinc Finger 159 249 - -
Bach4g01483 311 SUPERFAMILY beta-beta-alpha zinc fingers 102 140 IPR036236 -
Bach4g01483 311 SUPERFAMILY beta-beta-alpha zinc fingers 187 224 IPR036236 -
Bach4g01483 311 PANTHER ZINC FINGER PROTEIN WIP2 21 279 IPR043584 GO:0003700|GO:0010468
Bach4g01483 311 ProSitePatterns Zinc finger C2H2 type domain signature. 121 141 IPR013087 -
Bach4g01483 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 119 146 IPR013087 -
Bach4g01483 311 FunFam Zinc finger protein WIP2 173 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01483 Bach-Chr4 10918745 10919853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01483 25 260 C2H2 Transcription Factor Family AT1G13290 72.541 2.18e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g01483 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01483 - - aprc:113870355 416.001