Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01480 ATGGATGGAGGTAGTTGCTTAGATGAAAGCACCACAACTGACTCGGTTTCTGTATCCCTCTCTCCGGTCACCACTCTTACTTCGCCGTTTTCGCCAACCCAGAAGCTGTCTCCGCCGCCGAATAGTCTTTATCGTGTCGGCAGCGGTACTAGCACTATTGTGGACTCCGATAGCAGCGCCGAGGCCGAGTCCCGGAAGTTGCCGTCGTCAAAATACAAAGGTGTGGTGCCCCAACCCAATGGCCGCTGGGGCGCTCAGATTTACGAGAAGCACCAGCGTGTGTGGTTGGGTACGTTCAACGAGGAAGACGAAGCCGCCAGGGCGTACGACATCGCGGCCCAGAGGTTCCGAGGAAAAGACGCCGTCACGAACTTCAAGCCCCTTGCCGCCGGCTCTACCGGAGATGACGACGACGACGAGGTCGAGGCGGCGTTTCTCAACGCGCATTCCAAGTCCGAGATCGTCGACATGCTCAGAAAACACACGTACAACGACGAGCTTGAACAGAGCAAGAAGAACTATTTATTATACGGTAACGGAAAGAGAATGAAAAACGGAGGGACCGTTAACGGTAACGGTTCAATATTCGGGTCGGGGACTTGTTCGGACCGGGTCCAGAAAGCGCGTGAACAGCTTTTCGAAAAAGTGGTTACACCGAGTGATGTCGGGAAGTTAAACCGGTTAGTTATACCAAAGCAGCATGCGGAGAAGCACTTCCCTTTACATAGCGGAAGCGCTTCTGCTTCTTGCGCAACTAAAGGAGTGCTTTTGAATTTTGAGGACGTTGGAGGTAAAGTGTGGCGATTTCGATACTCGTATTGGAATAGTAGCCAGAGCTACGTGCTCACCAAAGGCTGGAGCCGGTTCGTGAAGGAGAAGAACCTCAAAGCCGGTGACACCGTTAGCTTCCACAGGTCGACCGGACCGGACAAGCAGCTGTACATTGATTGGAAAGCAAGGCAGCATGATTGTAGTAATAACAACGCCACCAAAAACTTCTCGAACCCGATCGGATCCAAGGTTGAACCGGTTCAGATGGTGAGGTTATTTGGGGTCAACATTTTGAAAATACCAGCTTCTGCTGCTGTGGAAGCGATTGCAGGAAGCTGCAATGGAATCAAGAGGAAAGAAATGGAACTGTTTACGTTTGAGTGTACTAAGAAGCCCAAGATAATTGGGGCTTTGTAA 1188 0.5135 MDGGSCLDESTTTDSVSVSLSPVTTLTSPFSPTQKLSPPPNSLYRVGSGTSTIVDSDSSAEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGKDAVTNFKPLAAGSTGDDDDDEVEAAFLNAHSKSEIVDMLRKHTYNDELEQSKKNYLLYGNGKRMKNGGTVNGNGSIFGSGTCSDRVQKAREQLFEKVVTPSDVGKLNRLVIPKQHAEKHFPLHSGSASASCATKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVSFHRSTGPDKQLYIDWKARQHDCSNNNATKNFSNPIGSKVEPVQMVRLFGVNILKIPASAAVEAIAGSCNGIKRKEMELFTFECTKKPKIIGAL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01480 395 SMART B3_2 213 321 IPR003340 GO:0003677
Bach4g01480 395 SUPERFAMILY DNA-binding domain 70 126 IPR016177 GO:0003677
Bach4g01480 395 SMART rav1_2 71 132 IPR001471 GO:0003700|GO:0006355
Bach4g01480 395 Gene3D - 201 331 IPR015300 -
Bach4g01480 395 Pfam B3 DNA binding domain 213 317 IPR003340 GO:0003677
Bach4g01480 395 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 66 362 IPR044800 GO:0003700
Bach4g01480 395 MobiDBLite consensus disorder prediction 1 73 - -
Bach4g01480 395 ProSiteProfiles AP2/ERF domain profile. 71 126 IPR001471 GO:0003700|GO:0006355
Bach4g01480 395 MobiDBLite consensus disorder prediction 1 58 - -
Bach4g01480 395 Pfam AP2 domain 70 118 IPR001471 GO:0003700|GO:0006355
Bach4g01480 395 CDD B3_DNA 212 306 IPR003340 GO:0003677
Bach4g01480 395 SUPERFAMILY DNA-binding pseudobarrel domain 211 316 IPR015300 -
Bach4g01480 395 ProSiteProfiles B3 DNA-binding domain profile. 213 321 IPR003340 GO:0003677
Bach4g01480 395 FunFam AP2 domain-containing protein RAP2.8 70 127 - -
Bach4g01480 395 CDD AP2 70 125 IPR001471 GO:0003700|GO:0006355
Bach4g01480 395 Gene3D AP2/ERF domain 70 127 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01480 Bach-Chr4 10900785 10901972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01480 5 395 B3 DNA Binding Superfamily AT1G25560 58.663 7.49e-146 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Bach4g01480 B3 1.6e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01480 K09287 - qsa:O6P43_025676 515.383