Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01477 ATGGCTGGACCATCCTGGTTGGTTGACAAAAGTAGAATTGCCACAAAAATAAAGAGTGCATCTGGAGCATGTGAACCTGAAAAAGTTGTATGGAAAAGCAATCCTACTAGAGCTTGTCCAAATTGCGCACATAGTATTGACAACAGTGATGTTGCACAAGAGTGGCCTGGATTGCCGAAAGGCGTGAAATTTGATCCAACTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGTTCTGAGAAGTTAAAACCTCATCCGTTCATTGATGAGTTTATCCTTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCTCAAAATTTACCAGGAGTGAAGCAAGATGGAAGTGCTTCCCACTTTTTCCATAGAGCAACCAAGGCTTACAATACTGGTACTCGAAAACGTCGAAAGATACATGGTCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACCAAACCTGTCATTTTGAACGGTATCCAGAAAGGCTGTAAAAAGATTATGGTTCTCTACGCAAGTATAGTTAGGAGAGGAAAAGCTGAGAAAACTAATTGGGTCATGCATCAATATCACCTAGGAACAGAGGAGGATGAAAAGGATGGGGAGTATGTTATCTCAAAAGTATTTTACCAGCAACAGCCGCAGCAGCAGGTCACATTGGGAGATAAAGATGGCCAGGATAATCTTGAACTTGTTAATGAAACAATTGCTAAAGCGGATCCTGTCACTCCCATGTCTGTGACTCCTGATCCTCCTGAAAGGCAATGTTCAGACCTTGACCAAGGACTAGAATCATATCCTATTCCTCAGCATCCCCAGATGGATTGTGTAAGTGATGCCATTCAAGTTGATGGCGAAGAGCATGCCAAAATTGATCCATCCGAGGTAGAAACTCACCCCATTGAAGGGAAGAACAATATCGAAGATCATGTTGGCGAAGAACCAAAATGGTATGATAGTGAGTCACAGCACCTTTTGGATTCACAACAACTTGTTGAAGCACTGTCCTTGTGCGAGGATATCCTTCAGAGCCAGTCTCCCAATAGGGATGAAAATGGGAAGACTGAAGCATGTAAGGACCGGCCTCGTCTTTCTGACTACGCTCATCTAGGACCAGAACATCTGAAGAAGGATTTAGAAGAATGTCAAAATCTTGTCCTTGATCCTGCAATCATAGACCTGGATACCCCTCCAGAGTTCCGACTAAGTCAGCTGGAATTTGGATCGCAGGATAGCTTTCTTTCATGGGGTGCTAACAAGCTGGTCGACTAG 1287 0.4336 MAGPSWLVDKSRIATKIKSASGACEPEKVVWKSNPTRACPNCAHSIDNSDVAQEWPGLPKGVKFDPTDQEIIWHLLAKVGSEKLKPHPFIDEFILTLEVDDGICYTHPQNLPGVKQDGSASHFFHRATKAYNTGTRKRRKIHGQDFGDVRWHKTGRTKPVILNGIQKGCKKIMVLYASIVRRGKAEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQPQQQVTLGDKDGQDNLELVNETIAKADPVTPMSVTPDPPERQCSDLDQGLESYPIPQHPQMDCVSDAIQVDGEEHAKIDPSEVETHPIEGKNNIEDHVGEEPKWYDSESQHLLDSQQLVEALSLCEDILQSQSPNRDENGKTEACKDRPRLSDYAHLGPEHLKKDLEECQNLVLDPAIIDLDTPPEFRLSQLEFGSQDSFLSWGANKLVD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01477 428 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 388 IPR044799 GO:0003700
Bach4g01477 428 FunFam NAC domain-containing protein 8 67 220 - -
Bach4g01477 428 SUPERFAMILY NAC domain 44 216 IPR036093 GO:0003677|GO:0006355
Bach4g01477 428 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Bach4g01477 428 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Bach4g01477 428 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01477 Bach-Chr4 10852508 10857029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01477 14 221 NAC Transcription Factor Family AT1G28470 54.378 9.23e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach4g01477 NAM 2.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01477 - - gmx:100799488 619.772