Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01453 ATGTATGAAGAGTGTGGTGGTCTTGATCCCAATGCAATAATGGTAGACGGTACAACTCCTGCGGGCTCGTCAGAAGATTGCTTCTCCCAAATGGTATCAGATCCCAATGTAGGGCTTTCTTTGGAAAACTTAGCATATCCTGCAGCCTGTGGAGAAGATGCCGCCACCCTCTCTAATAGAGTTGCTGCAGCCACTGCCATGGAGATTGCACATCAAAACCATCTGGGTTTTAACCAGGAAAAATCCTACAATGATAACAACAACTTTGACACCAATTTCCCACAAGAGCCAAATCATGATTCAAGTCAAGTATTTTACTTTGACAAGTCTAATTGGGAGCGCCAAAATCATTATCAGGACCAACAATTTCTGCAAATGGAACTGCAAAATGGCACCCAAAACTACCACTTTTACCCTACACCAGATCTCCTTAATCTCCTTCACTTACCCAAATGCTCTCCTGCAAACTCATCAATCTCTTTTGTGAACCCTACCCAGAAGGCCACCAATCTTCAAAATTCTTCCTTTGTTGGTGGGTACCAACAAATCGGGGTTGACAACACAAACTCATCCTCTGTTTTGTATGATCCTTTATTGCATTTGAATCTGCGTGCACAGCCTCCAGCTATCAGAGAATTGCTTCAGTCTCTTCCCCATGGCTATAGCTTGCCAGCCTCAAGAAATGACTTTGTCTTTGGTGCAGGAGGAGATGACGGAGAAGGCAGTGGGCGAGCATATCAAGATGGAGATCACGTGAGAGATTTCGAAAATGGGGTCCTAGAGTTTACCCAGGACATGGTTTCTGTCGGTAAAAAAGGAGGAAAAAGGACCAAACAGTTTACCAGTGAGAAGCAAAGAAGAGTGGATTTGGGTAGCAAATTTGAGGCTTTAGGGGAACTGATCCCAAGCCCTTCCAAGAACGACAGAGCATCTGTGGTTGGTGATGCTATTATCTATATCAAAGAGCTTCTTAGAACAGTGAATGAGCTCAAATTACTACTGGAGATGAAAAGATGCCGGAAAGAAAGCGTCAAGAGGCGCAAGGTTGAAGATGCTGCAGGGGACTTGGAGGTGGAGAGCTGCAACTTGAAGCCACTTGGCGACCAAGACCTCTCCTACAATGGATGTTTAAGGAGCTCATGGCTGCAGAGGAAATCCAAAGACACCGAGGTTGATGTTCGCATTGTTGATGATCAAGTGACAATCAAACTAGTTCAAAGAAAGAAGATCAATTGCTTGCTCTATGCTTCCAAGGTGCTGGATGAGCTTGAGCTGGATCTCCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGTTTCTTGTTCAATAGCAAGATTTATGAAGGTTCTACAGTGTATGCAAGTGCAATAGCCAACAAGCTTATTGAGGTAATGGACAGAAACTTTGCAGCAGCATGA 1422 0.4444 MYEECGGLDPNAIMVDGTTPAGSSEDCFSQMVSDPNVGLSLENLAYPAACGEDAATLSNRVAAATAMEIAHQNHLGFNQEKSYNDNNNFDTNFPQEPNHDSSQVFYFDKSNWERQNHYQDQQFLQMELQNGTQNYHFYPTPDLLNLLHLPKCSPANSSISFVNPTQKATNLQNSSFVGGYQQIGVDNTNSSSVLYDPLLHLNLRAQPPAIRELLQSLPHGYSLPASRNDFVFGAGGDDGEGSGRAYQDGDHVRDFENGVLEFTQDMVSVGKKGGKRTKQFTSEKQRRVDLGSKFEALGELIPSPSKNDRASVVGDAIIYIKELLRTVNELKLLLEMKRCRKESVKRRKVEDAAGDLEVESCNLKPLGDQDLSYNGCLRSSWLQRKSKDTEVDVRIVDDQVTIKLVQRKKINCLLYASKVLDELELDLQHVAGGHIGDFCSFLFNSKIYEGSTVYASAIANKLIEVMDRNFAAA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01453 473 Coils Coil 320 340 - -
Bach4g01453 473 SMART finulus 280 329 IPR011598 GO:0046983
Bach4g01453 473 Pfam Helix-loop-helix DNA-binding domain 275 323 IPR011598 GO:0046983
Bach4g01453 473 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 341 IPR036638 GO:0046983
Bach4g01453 473 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 274 323 IPR011598 GO:0046983
Bach4g01453 473 Gene3D - 265 341 IPR036638 GO:0046983
Bach4g01453 473 CDD bHLH_AtMYC1_like 280 351 IPR045896 -
Bach4g01453 473 PANTHER TRANSCRIPTION FACTOR BHLH91 53 472 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01453 Bach-Chr4 10583467 10585128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01453 1 473 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 39.148 3.13e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g01453 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01453 - - jre:108994595 458.373