LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g01442	AAACTGCTGACACTGTTTTGTGCCAGACATTAGAGTGTGAGTGAGTGCAATTCGGGCAAAAGAAGCATGAAGCATGGTACTACAGTTCCCTTTAGATGAAAACATTGACATGTAACAGAAACAAACCCAATTCAACTTGGTGCTGCTGAATCTTTCAAAACCTGCTCTTTAGTCTTTATTTGCTTTCTTTTAGGCATCTGGGTACTTGGCTTCTTTTCAGAGTTCTTTGTTCTCACAAATAAGCTTCTACTTATCCTTTCAACAACATGGAAAAGAGAGTCTATGCTGCTTTCTTTTGTTTTGCTTTCTTCTTGCTATGGACTTTAGAGGCTGCTGCTTTGCTTAGCCCTAAAGGTGTAAACTATGAAGTGCGAGCTTTAATGGACATTAAAGGGTCTTTGAAGGATCCTCATAATTCCCTTTATAACTGGGACGGTGATGCTGTGGATCCTTGTTACTGGAATATGGTCACTTGTTCTCCTGATCGTTTTGTGATTGCCTTAGGCATTCCAAGCCAGAACTTATCTGGGACTCTTTCCCCAAGCATAGGCAACTTAACATATCTGCAGTCTGTGCTCCTTCAAGATAACAATATTTATGGGCATATTCCCCCTGAGTTTGGGAAGCTTCAAAAGCTTGAAACTCTTGATCTTTCTGATAATCACTTCAGTGGTCAACTTCCAGATACTCTCTCCCACATGAAGAGGCTCCATTACTTGCGGCTAAATAATAACAGTCTCACTGGAACAATTCCATCCTCTCTGGCCAACATGACTCAACTTGCCTTCTTGGATCTCTCATATAATAACTTGAGTGGACCTGTACCCAAATTAGGTGCAAAAACATTCAATATTGTGGGCAATCCTCAGATATGTGCCCATGGAACTGAGCAAAACTGCTTTAGAACAACACCGCTGTCTTCTACCTTGAATAGTTCTAAAGATCTACAATCCTCTGGTAGATCAAAGAACCAAAAAGTTGCCTTGGCATTCGCTTCAAGCATAAGCTGCGTCTGTCTGCTAATTCTGGGCTTTGGATTTCTTCTCTGGTGGAGACACAGATACAACAAGCAAATTTTCTTTGATGTTAATGAACCACACCATGAAGAAATATGCCTCGGAAACCTCAAGAAGTTCCATTTCAGAGAACTTCAGGCTGCTACAAATAACTTCAGCAGCAAGAACTTGATTGGCCAAGGTGGTTTTGGAAATGTCTACAAAGGTTATCTCCCAGATGGTTCAGTTATCGCAGTAAAAAGGCTTAAAGATGGTAATGCCATTGGTGGTGAGGTTCAATTTCAGACTGAAGTTGAGATGATCAGCTTGGCTGTGCATCGAAATCTCCTTCGCCTCTATGGATTCTGCATGACAGCTACAGAGAGGATCTTGGTTTATCCGTACATGTCCAACGGCAGTGTTGCCTCCCGTCTTAAAGCCAAGCCTACTTTGGATTGGGGAACAAGGAAGAGGATAGCATTAGGGGCTGCAAGGGGCTTACTCTATCTGCATGAGCAGTGTGACCCCAAAATAATCCATAGGGATGTCAAGGCTGCAAACATCTTGCTTGATGATTACTGTGAAGCGATTGTAGGTGATTTTGGGTTGGCAAAGCTGTTGGATCACCATGATTCGCACGTGACAACAGCAGTGAGAGGCACTGTAGGCCACATAGCTCCAGAGTATCTCTCAACAGGCCAGTCCTCTGAGAAAACAGATGTTTTCGGGTTTGGAATCCTTCTCCTTGAATTGATTTCAGGCCAAAGAGCTCTTGAATTTGGGAAAGCAGCAAACCAGAAAGGAGCCATGCTTGACTGGGTGAAGAAAATCCATCAAGAGAAGAAACTTGACTTATTAGTAGACAAGGACTTGAAAAACAACTATGACAGAATAGAGCTTGAAGAAATTGTTCAAGTTGCTCTTTTGTGTACGCAGTACCTACCAAGTCATAGACCTAAGATGTCTGAAGTGGTTCGGATGCTTGAAGGAGATGGACTAGCAGAGAAGTGGGAAGCCTCACAGAGAGCTGAATCAACTAGGAATAAAGCAAATGAATTCTCCTCTTCAGAGCGCTACTCAGATCTTACTGATGACTCTTCATTGCTTGCACAGGCAATGGAGCTTTCTGGACCAAGATGATATAAATGCTAGCAAATAGTTGTGTGGAAGCAAGTCTAATGTACATTAGCATCATAATTAACACCACAAAGAAGTTAGTTATGTTAAATTTTCCCTGTACAGAAAGTCATAATAGATTTGAAAAAACTGACACAGGATTGAGTGTTGTATGTTCTTGTTACGAAAGCTGTTTACAGACGATGTCGTTTTGTGTCTTTCAACTTGTAAGAATAATCTTCACGGAATTGATTGCTTCTT	2372	0.4161	MEKRVYAAFFCFAFFLLWTLEAAALLSPKGVNYEVRALMDIKGSLKDPHNSLYNWDGDAVDPCYWNMVTCSPDRFVIALGIPSQNLSGTLSPSIGNLTYLQSVLLQDNNIYGHIPPEFGKLQKLETLDLSDNHFSGQLPDTLSHMKRLHYLRLNNNSLTGTIPSSLANMTQLAFLDLSYNNLSGPVPKLGAKTFNIVGNPQICAHGTEQNCFRTTPLSSTLNSSKDLQSSGRSKNQKVALAFASSISCVCLLILGFGFLLWWRHRYNKQIFFDVNEPHHEEICLGNLKKFHFRELQAATNNFSSKNLIGQGGFGNVYKGYLPDGSVIAVKRLKDGNAIGGEVQFQTEVEMISLAVHRNLLRLYGFCMTATERILVYPYMSNGSVASRLKAKPTLDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAIVGDFGLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKLDLLVDKDLKNNYDRIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRNKANEFSSSERYSDLTDDSSLLAQAMELSGPR	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g01442	622	Gene3D	Phosphorylase Kinase; domain 1	271	378	-	-
	Bach4g01442	622	ProSitePatterns	Protein kinases ATP-binding region signature.	308	330	IPR017441	GO:0005524
	Bach4g01442	622	FunFam	Somatic embryogenesis receptor-like kinase 1	379	591	-	-
	Bach4g01442	622	Pfam	Protein kinase domain	303	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g01442	622	FunFam	Somatic embryogenesis receptor kinase 1	271	378	-	-
	Bach4g01442	622	ProSiteProfiles	Protein kinase domain profile.	302	557	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g01442	622	SUPERFAMILY	L domain-like	33	196	-	-
	Bach4g01442	622	MobiDBLite	consensus disorder prediction	582	608	-	-
	Bach4g01442	622	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	31	213	-	-
	Bach4g01442	622	Gene3D	Transferase(Phosphotransferase) domain 1	379	591	-	-
	Bach4g01442	622	Pfam	Leucine rich repeat N-terminal domain	32	71	IPR013210	-
	Bach4g01442	622	Gene3D	Ribonuclease Inhibitor	31	213	IPR032675	-
	Bach4g01442	622	SUPERFAMILY	Protein kinase-like (PK-like)	279	572	IPR011009	-
	Bach4g01442	622	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	10	582	-	-
	Bach4g01442	622	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	421	433	IPR008271	GO:0004672\|GO:0006468
	Bach4g01442	622	SMART	serkin_6	302	557	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g01442	622	Pfam	Leucine rich repeat	123	182	IPR001611	GO:0005515
	Bach4g01442	622	MobiDBLite	consensus disorder prediction	589	608	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g01442	Bach-Chr4	10449573	10453198	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g01442	1	622	Receptor kinase-like Gene Family	AT5G16000	72.943	0.0	942

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Bach4g01442		Pkinase	1.8e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g01442	-		-	gmx:100790194	1047.34