Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01427 ATGGATGACAGAGAAAAATTTGTGCTTGATAGAAACGAAGATTCTATGAATTATTCAACTGGTATGTCTTCCGATTGGCGATTTGGGGGTGCTAACCTTGCAAATGCTTCTGTGGGTTTAGTTCCCATAGGAAATTCAGTGGCTGTTAGCAGAGGGGATCTAATTGGTTCTTCTTCTTGTTCCTCTGCTTCAATGGTAGATTCATTTGGTCCAAACTTTTGGGACCATTCCTCCAACGCCCAAAACTTGGGATTTTGTGACATTAATGTGCAGAATAATGGTAGTAGCTCTTCAAACCCAATTGGTATCAGGAAAGATGGCCTTGTCCTTTCAAGAGCTGGTATTGATAGAACACTTGAAATGGGCTGGAACCCAGCAAATTCTATGTTGAAAGGGGATGTCTTTTTACCGAATGGACCAGGAACGTTTCCAACTGATTCTGCATTTATTGAGCGTGCTGCAAGATTCTCATGCTTTAGTGGAGGGAATTTTGATGAAATGGTGAACTCATTTGGGATCCCCCAGTCCGTGGGTCTATATGTTAGGAATGGGGGTACAATGCAGGGAGTACGAGATGTTCTTGCAGGCCATGGATTAAAATCACCATCTGGAGGACAATCTCAAGGAAGTGATCCAAATGCAGGTGAATTTTCCAAAGATGTGTCTCCATCCGTTGAGCGTCTAGCTCCAGAAGGAAGCGCACTCAAGAATGAAAAAAGAAGTGAAAGCCGTGTATCATCTCAAGATGAAGCGAAACATACCGTAGGTAAGTCCAATAATGAGTCTGATGGAGCTGAATCTAGTGGTGATGATGGTCAAGATGATTCCCAAATGTTGGAGGGTACTAGTGGGGAACCTTCTCTCAAAGGACTGAACTCAAAGAAAAGGAAAAGAAATGGGCAGGATGTTGATAATGATAAAGCTAAAGCAGCTCCAGAATTACCAACTGAAGCTGTAAAGGACAATTCTGAGGGTCGACAGAAGGGAGACGAACAACCAACTTCAACATCCAAGGCTACTGCGAAGGATGCTAAACAGGGGTCTCAAGCTTCCGATCCGCCAAAAGAGGAATACATACATGTTAGGGCTCGCCGTGGTCAAGCAACAAATAGTCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAAATCAGTGAAAGGATGAAATTTCTTCAAGACCTTGTTCCCGGGTGCAGTAAGGTCACTGGCAAAGCAGTAATGCTAGACGAAATCATTAACTATGTACAGTCACTTCAACGGCAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCCCGACTTGATTTTAATATAGAAGGACTTCTGGCTAAAGATATTCTTCAGCAACGGCCTGGCCCTTCATCTGCACTGGGTTTTTCTCCAGACATGTCTATGGCATTTCCTCCATTACATTCATCTCAACCAGGACTAATTCAGTCGACGCTTTCTGGCATGGCAAACTCATCTGACATCCTTCGGAGAACCATTCATCCGCAATTGGCACCTTTGACTGGAGGATTCAAGGAGCCTAATCAGCTACCTGATGTCTGGGAGGATGAACTTCACAATGTTGTGCAGATGAGCTATGCAACCACTGCTCCCTTGAGTAGCCAAGACGTGGATGGTCAAACGAAAATTGAACTTTGATTATTCAGTCATGGTGTCCTGCATCTTCATCTTGGTTTATTTTTCACGTGCTTGGTAGTCAGAGGGAAATAAACTAAGCTCGCTGTTTTACCTCTGACTTGCCAAACTCAAAAGAGCAGTAACACAGCCATACTTACCCAGAAGAGATGCTAGTGAGTATTGCTATGGTATCAAGCATTTGGAGAAGGGAACTGACTCTAGGTTATATAGATGAAGTAGAGCAGTATCCATGGATGTTTCTTTTCTTGCAGCATGAAAATACATTATGCTTAGGTGGAAGGCTATTTAGGGGAAATAGGTTTGCT 1955 0.4317 MDDREKFVLDRNEDSMNYSTGMSSDWRFGGANLANASVGLVPIGNSVAVSRGDLIGSSSCSSASMVDSFGPNFWDHSSNAQNLGFCDINVQNNGSSSSNPIGIRKDGLVLSRAGIDRTLEMGWNPANSMLKGDVFLPNGPGTFPTDSAFIERAARFSCFSGGNFDEMVNSFGIPQSVGLYVRNGGTMQGVRDVLAGHGLKSPSGGQSQGSDPNAGEFSKDVSPSVERLAPEGSALKNEKRSESRVSSQDEAKHTVGKSNNESDGAESSGDDGQDDSQMLEGTSGEPSLKGLNSKKRKRNGQDVDNDKAKAAPELPTEAVKDNSEGRQKGDEQPTSTSKATAKDAKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPGPSSALGFSPDMSMAFPPLHSSQPGLIQSTLSGMANSSDILRRTIHPQLAPLTGGFKEPNQLPDVWEDELHNVVQMSYATTAPLSSQDVDGQTKIEL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01427 549 Gene3D - 364 437 IPR036638 GO:0046983
Bach4g01427 549 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 242 467 IPR024097 GO:0006355
Bach4g01427 549 SMART finulus 373 423 IPR011598 GO:0046983
Bach4g01427 549 MobiDBLite consensus disorder prediction 195 355 - -
Bach4g01427 549 MobiDBLite consensus disorder prediction 201 217 - -
Bach4g01427 549 Pfam Helix-loop-helix DNA-binding domain 370 418 IPR011598 GO:0046983
Bach4g01427 549 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 436 IPR036638 GO:0046983
Bach4g01427 549 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 367 417 IPR011598 GO:0046983
Bach4g01427 549 FunFam Basic helix-loop-helix transcription factor 364 436 - -
Bach4g01427 549 CDD bHLH_AtBPE_like 357 442 - -
Bach4g01427 549 MobiDBLite consensus disorder prediction 260 289 - -
Bach4g01427 549 MobiDBLite consensus disorder prediction 329 347 - -
Bach4g01427 549 MobiDBLite consensus disorder prediction 232 259 - -
Bach4g01427 549 MobiDBLite consensus disorder prediction 290 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01427 Bach-Chr4 10118943 10121924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01427 11 530 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.516 4.69e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g01427 HLH 7.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01427 - - gmx:100797720 769.615