Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01409 ATGAGAGAAGGGAAGGGTAATCTGGAAGAAGACGAGTACGAGGAGGAAGATTTCGGTTCTAAGAAAGAAGGGCCTAACAGCAATAATAGCAACAAAGATGCAAAATCTATCGATAAGGCTAGTGCTACAAGGTCAAAACATTCAGTAACCGAGCAGCGAAGAAGGAGCAAGATAAATGAGAGATTCCAGAAATTGAGGGATCTCATACCTCATAGTGATCAGAAGAGGGACACAGCATCATTCCTATTAGAGGTGATTGAATACGTTCAGTACTTGCAGGAGAAGGTACAAAAGTATGAAGGTTCATATCAAAATTGGAATCAAGAGCCTACAAAGCTGATGCCATGGAGAAACAGTCATTGGCGTGCTCAAAGCTTTGTTGGTCAACCTCAAGCTGTAAAGAATGATTCTGGTCCAGTATCACCTTTTCCTGGGAAATTTGATGAGAATAACATTAGTATCTCTCCAACTATGCTCAGTGGAACCCAGAATATGATAGATACTGAACAGAGCAGGGATATTGTCACCAAAACAGCAGAGAGGCAACCTGAATTAGCAGGCAAGGGAATACCTCTGCCCATGCCAACGCATGCTGTTCCTGTGAGAAGTGATGGTGCACTTGCCCATCCTCTGCAGGGCCCTGTTTCCGATGCACAATCAACTGAGCTTCCAGCCACTAGTGTCCCGCAGAACCAACAGGATGAACTGGCAATTGAAGGTGGTACAATTAGCATCTCAAGTGTATACTCCCAAGGGTTGTTGAACAATTTGACTCAAGCGCTGCAGAGTGCTGGTTTAGATTTGTCGCAGGCTAGCATCTCAGTTCAGATTAATCTTGGAAAGCAGGCAAATAGAGGACCAAGCAGTGGGACGTCTGCTCACCAGAATCATGATAATCCCCCTTGTAGTGATGAAGGAATAGTACATTTTAGAGATGCTGGGAATGGAGAAGACACGGATCAAGCTCAGAAGCGGCTGAGAACATAAAATAAATGTGATCTAAGGTGGCCTTCTTGGGACTTCATCCAGATATTCATTTACTCATCCTTTCTGGTTATATTGTACATCCTTCACCATTTGTTTATGGATATTCACCTTCAATGTCCTCTCTCTCTCTCATGAAGGCTATTTTAGAATACTATAAAGCCTAAATTCAGGTATTGTTTGTGGATGTCACAATGTACCTTTGGTGGGCAGCGCTTGGGTTTTGGGAGTTGTCATCAATTGCTTAAAAATTTT 1239 0.4294 MREGKGNLEEDEYEEEDFGSKKEGPNSNNSNKDAKSIDKASATRSKHSVTEQRRRSKINERFQKLRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWNQEPTKLMPWRNSHWRAQSFVGQPQAVKNDSGPVSPFPGKFDENNISISPTMLSGTQNMIDTEQSRDIVTKTAERQPELAGKGIPLPMPTHAVPVRSDGALAHPLQGPVSDAQSTELPATSVPQNQQDELAIEGGTISISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGKQANRGPSSGTSAHQNHDNPPCSDEGIVHFRDAGNGEDTDQAQKRLRT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01409 328 Coils Coil 89 109 - -
Bach4g01409 328 MobiDBLite consensus disorder prediction 310 328 - -
Bach4g01409 328 MobiDBLite consensus disorder prediction 282 328 - -
Bach4g01409 328 FunFam BHLH domain class transcription factor 40 112 - -
Bach4g01409 328 MobiDBLite consensus disorder prediction 37 60 - -
Bach4g01409 328 SMART finulus 48 98 IPR011598 GO:0046983
Bach4g01409 328 MobiDBLite consensus disorder prediction 282 299 - -
Bach4g01409 328 Pfam Helix-loop-helix DNA-binding domain 44 93 IPR011598 GO:0046983
Bach4g01409 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 92 IPR011598 GO:0046983
Bach4g01409 328 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 8 328 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bach4g01409 328 Gene3D - 39 114 IPR036638 GO:0046983
Bach4g01409 328 CDD bHLH_AtBIM_like 41 117 - -
Bach4g01409 328 MobiDBLite consensus disorder prediction 1 60 - -
Bach4g01409 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 115 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01409 Bach-Chr4 9934044 9937629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01409 1 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 60.208 3.08e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g01409 HLH 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01409 - - pcin:129321267 508.834