LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g01397	ATGATAAGAAAAATGATGAATTTTTGTACATGTTCTATCTTCTTCATTCTCCTCTTGCACCTTCAGCTCATCCACCTACTAAATGCTTTAGCTGATGATGCCAGTTATGTTCCCTCAGAAACCATAGTTCTCAATTGCGGCTCTAATTCATCAGACTTTCTATCCTATGATGGCAGGAACTGGACTGGCGATGTTGATTCACCTTATTTACCCTTTGATGCAGATATCAAGTCCCTGATAGGCATAGCCCCAGTGCCTTTTCCATCCATTCCCCAAGTTCCTTATATGACTGCTCGGATCTTCCAGTCCAAATTCACCTACAGATTCAATGTGACTCCTGGTCCAAAGTTCATTCGCCTTCACTTCTATCCAGCTTCTTACTTGGGATTCAATGTCTCCAAATCTTTTTTATCTGTCACTACTGCTAACTTCACTTTCCTACATAATTTCAGTGCTTCTCTCAACATTGATTATCTCAACTCAACATATCTAGTGAAGGAATTCATCGTCCATGAAATTGACAGGACATTGGAGCTGACTTTCACTCCAACATCTAATGCTTCTGATGCCTATGCATTTGTGAATGGAATTGAAGTTGTTTCAATGCCCCTTTATTTCTATACTAGCGGTGATGCTCCTCTTCCTGTAGTTGGCCATCTTCCGAAAGTATTATTCATTGACAACAATTGTGCCCTGGAAACCATGTATAGAATCAATGTAGGAGGTGATGATATTCCATCCAAATACGATACAGGAATGTTTCGCACTTGGACCAGAGACTCAGATTTCATACTTGGAGCTGCAGACTTCGAAGCTTTTGATATGCAAATGCAAGTTTTGTATTCAGCTACTATTCCAGCATATACCGCTCCAGCAAGTGTCTATCGCACAGCCCGGTCAATGCCCTGGTACAGGAGTGTCGTCAATTTAAATTATAACCTAACATGGTTCTTTCCTGTTGATTCTGGTTTCAACTATCTCATTAGACTTCACTTCTGTGAAGTTGATCGAGAGATAACCAAGGTAAATCAACGAACCTTCAATATATATCTTAATAATCAAACAGCTCAGGAAGGAGCTGACGTAATTGCCTGGAGTGGTCGGCGTGGTGCTCCTGTGTATAAAGACTACGTTGTGATGATTCCAGAATCAAGCATGGGAAAGCAGGATCTCTGGCTGGATCTGCACCCAGATGCAGAATCAAAAACAGAATCCTATAATGTTATCTTGAATGGGGTAGAGATCTTCAAAATGAGCCATACAGATGGAAATCTTGCTGGGTTTAACCCTCGCGAAAGTAAGTCTCAGTCAGCTGTCCAAGTCCAACAAGTTGCACCTTCTAGAAAGCCAAAGAAGATCATATTCATCAGCATCGGATGTGGACTTGGTGCATTGGCATTATCATTACTCTTATGTTTCCTTTTCTATAGGTTTAAAGTGATTAGGTGGAGGAGCATGTCATGTTTTTCTCTCTTTTACCATGCTCCTAGTCAAATGCAAAGGGCAAAGCAGTCATCTTCTTGTATTATTTTTTCAATAGATGAGATAAGAGGTGCAACAAATAACTTCGACGAGGCTCTAATCGTTGGCACAGGAGGATTTGGTAAGGTTTATAAGGGTAGCTTTGATTGTGGAGCTACCTTTGTAGCCATAAAGCGTGGAAATCCAATGTCAGAACAAGGTGCATCAGAATTTTACACTGAGATACAAAATCTCTCTCAACTTCGCCATCACAACTTAGTTTCTCTTACTGGTTATTGCCAGGAAGAAGGGGAGATGATATTAGTCTATGACTTTGTCGTCAATGGGACCCTGTTTGACCATCTTCACATGCTTGGGGAAAAACCCCCATTGTCATGGATTCAACGTCTTGAGATTTGCATTGGAGCTGCAAGGGGTTTACACTACCTGCATACTGGCACAGGGCAGAAGATCATCCATCGAGACATCAAGCCAACTAACATACTGCTAGATCATAACTGGGTGGCCAAAATTTCTGATTTTGGATTGTCAAAGGCAAGCTTCCCTTCCTTAAGTAACACCAACGTCAAAGGCACTATCGGATACTTAGCCCCAGAGTACTTTAGGTGTCAGAGATTGAGTGAGAAATCTGATGTTTACTCATTTGGGGTGGTGTTATTGGAGGTGCTAAGTGCAAGGCCTGCTTTGAGTCCAGTTGAAGATGAACAGCATCCAAACTTGGCTGATTGGGCACGATATTGCTATGATAAGGGCAATATAGATCAACTGCTGGATCCAAACCTGCAAGGGAAAATAACAAGAGAGTCTTTAGAGATATATCTGGGGGTGGCCAATAAATGTTTGGCTGAAAATGCAGTGATGAGACCACTAATGGGCGATGTGCTACAGAACCTTATAGTGGCATTGCAACTACAGAAGAATGCGGATTTGGCGCAAAATAGAGTTCTTCATATTGAAGAGAATACTGGTTCGAATAAAAATTCTGACATGACACCAGGGATTGAGTTCTCTGAGATCATGGTGCCTCTTGGACGATGA	2520	0.4159	MIRKMMNFCTCSIFFILLLHLQLIHLLNALADDASYVPSETIVLNCGSNSSDFLSYDGRNWTGDVDSPYLPFDADIKSLIGIAPVPFPSIPQVPYMTARIFQSKFTYRFNVTPGPKFIRLHFYPASYLGFNVSKSFLSVTTANFTFLHNFSASLNIDYLNSTYLVKEFIVHEIDRTLELTFTPTSNASDAYAFVNGIEVVSMPLYFYTSGDAPLPVVGHLPKVLFIDNNCALETMYRINVGGDDIPSKYDTGMFRTWTRDSDFILGAADFEAFDMQMQVLYSATIPAYTAPASVYRTARSMPWYRSVVNLNYNLTWFFPVDSGFNYLIRLHFCEVDREITKVNQRTFNIYLNNQTAQEGADVIAWSGRRGAPVYKDYVVMIPESSMGKQDLWLDLHPDAESKTESYNVILNGVEIFKMSHTDGNLAGFNPRESKSQSAVQVQQVAPSRKPKKIIFISIGCGLGALALSLLLCFLFYRFKVIRWRSMSCFSLFYHAPSQMQRAKQSSSCIIFSIDEIRGATNNFDEALIVGTGGFGKVYKGSFDCGATFVAIKRGNPMSEQGASEFYTEIQNLSQLRHHNLVSLTGYCQEEGEMILVYDFVVNGTLFDHLHMLGEKPPLSWIQRLEICIGAARGLHYLHTGTGQKIIHRDIKPTNILLDHNWVAKISDFGLSKASFPSLSNTNVKGTIGYLAPEYFRCQRLSEKSDVYSFGVVLLEVLSARPALSPVEDEQHPNLADWARYCYDKGNIDQLLDPNLQGKITRESLEIYLGVANKCLAENAVMRPLMGDVLQNLIVALQLQKNADLAQNRVLHIEENTGSNKNSDMTPGIEFSEIMVPLGR	839

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g01397	839	Gene3D	Phosphorylase Kinase; domain 1	489	599	-	-
	Bach4g01397	839	SMART	serkin_6	523	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g01397	839	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	600	799	-	-
	Bach4g01397	839	FunFam	receptor-like protein kinase FERONIA	490	599	-	-
	Bach4g01397	839	Gene3D	Transferase(Phosphotransferase) domain 1	600	817	-	-
	Bach4g01397	839	ProSiteProfiles	Protein kinase domain profile.	523	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g01397	839	Coils	Coil	795	815	-	-
	Bach4g01397	839	FunFam	FERONIA receptor-like kinase	230	419	-	-
	Bach4g01397	839	PANTHER	OS03G0124300 PROTEIN-RELATED	14	487	IPR046957	GO:0004672
	Bach4g01397	839	Pfam	Protein kinase domain	528	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach4g01397	839	ProSitePatterns	Protein kinases ATP-binding region signature.	529	552	IPR017441	GO:0005524
	Bach4g01397	839	Pfam	Malectin-like domain	44	418	IPR024788	-
	Bach4g01397	839	CDD	STKc_IRAK	529	792	-	-
	Bach4g01397	839	SUPERFAMILY	Protein kinase-like (PK-like)	506	790	IPR011009	-
	Bach4g01397	839	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	645	657	IPR008271	GO:0004672\|GO:0006468
	Bach4g01397	839	Gene3D	-	41	203	-	-
	Bach4g01397	839	Gene3D	-	230	420	-	-
	Bach4g01397	839	FunFam	FERONIA receptor-like kinase	41	203	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g01397	Bach-Chr4	9842973	9845492	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g01397	30	803	Receptor kinase-like Gene Family	AT3G51550	51.496	0.0	754

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Bach4g01397		Malectin_like	1.1e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g01397	-		-	gmx:100776859	1016.14