Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01389 ATGGGGAGAGGAAGGGTGGAGCTGAAGAGGATAGAGAATAAGATAAATCGCCAGGTGACATTTGCAAAGAGAAGGAATGGGTTGCTGAAGAAGGCTTATGAGCTTTCAGTGCTGTGTGATGCTGAGGTTGCCCTCATCATCTTCTCTAACCGTGGAAGGCTGTATGAGTTCTGCAGCGGCACAAGCATGGCCAAGACACTTGAACGGTATCAAAGATGCAGTTATGGCACCTTGGAAGTTGGCCAGCCTGCAATGGAGACACAGAGATGCTACCAAGAGTATCTCAAGATCAAATCACAAGTTGAAGAACTACAGCGTACGCAGAGAAATCTCCTTGCGGAAGAACTGGAAAACTTAGGCCTAAAGGATCTTGAGCAGCTTGAGCATCAGCTGGATTATACATTGAAGAAAATCAGATGCAACAAGACACAAAATATGCTTGATCAACTCTCTGATTTGCAAAGGAAGGAAGAGGCGCTATTGGAAACTAATAGAGCCTTGAGGAGGAAGATGGATGAAATGAATATTTCCCTTCAACCATCATGGGAACAAAATGCTCTATGCAGCCGCCACCCAGCTTCCCAATCTGATGGATACTTCGAATCTCTAGCACCACCATGCAATAGTAATTTGCAGATTGGATATGGTCCTGCAGTGACAAATGAAGCAGGAGCAGTTGCCGGAACCTCGAGACAAAATGCTAATACTGATCAATTCATGCTTGGATGGATGGCCTGA 738 0.4526 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGRLYEFCSGTSMAKTLERYQRCSYGTLEVGQPAMETQRCYQEYLKIKSQVEELQRTQRNLLAEELENLGLKDLEQLEHQLDYTLKKIRCNKTQNMLDQLSDLQRKEEALLETNRALRRKMDEMNISLQPSWEQNALCSRHPASQSDGYFESLAPPCNSNLQIGYGPAVTNEAGAVAGTSRQNANTDQFMLGWMA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01389 245 Coils Coil 94 117 - -
Bach4g01389 245 Coils Coil 150 173 - -
Bach4g01389 245 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 165 - -
Bach4g01389 245 SUPERFAMILY SRF-like 2 82 IPR036879 GO:0003677|GO:0046983
Bach4g01389 245 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach4g01389 245 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach4g01389 245 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Bach4g01389 245 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach4g01389 245 Gene3D - 13 76 IPR036879 GO:0003677|GO:0046983
Bach4g01389 245 Pfam K-box region 86 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach4g01389 245 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach4g01389 245 FunFam MADS-box transcription factor 1 13 88 - -
Bach4g01389 245 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach4g01389 245 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach4g01389 245 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach4g01389 245 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01389 Bach-Chr4 9765478 9772285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01389 1 214 MADS-box Gene Family AT5G15800 64.000 9.59e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach4g01389 K-box 5.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01389 K09264 - gmx:100811049 332.028