Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01387 ATGGAATCTTGGAGTTACACCCCAGAAGAGAAAAGCTATTTGTTTTCTGAGGAAATGGACTTTTCACTTGATGCTTTTCTGAGAACTAGAAAAGCACTGGTTGAATGGGACAATAAGGCCACCGGTAACTTTGAAAAGGATGGATTTATTTCAGACGTAGAAGTAGTTAAGAGCATGGAATTCGTGGACTTGGGATTTCCTGATCTGTTCCGAAAATCTTTTCATGGTAGCCAGCCACTGGAGACATCTAGTTATGACCTAGACAGTAATTCTAGTAAAATAGTTAATACCTCTACTCATGTTGTTGCTTTGGATTCATCTTTGGGGGAAGAAGAATCTGAGTCAAAGCATTCCAGTCCTCTAGTCAAATCTAAAAGTCATGATTCATCACTGATTGACTTGAAGCTTGGAAGATTGGCAGATTGTAAAGAAGCAAGTAGTAATGAATTTGTAAAAGAAGGACTAGCTTTATCCTCTATACCTTCAAGGGCACTTGCGAAGAGAGCTCGCACTTCTAGCTCACCTACTCAGAAACCTGTATGTCAAGTTTATGGTTGCAATATGGATCTTAGCTCCTCAAAAGAGTATCACAAAAGGCATAAAGTTTGTGATGTTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCAGTGTAGTAGGTTCCATTTGCTAGCTGAGTTTGATGATGGTAAGCGTAGCTGTCGCAGACGCCTAGCAGGACATAATGAACGCAGACGGAAACCTCAGTTTGATTACATATCTGGTAAACCATACAAGATGCTTCAATCATATCAAGGTGCCAAGTATCTCGGGGCTTCATTGCAGAAGAGACCCCAGTTTGCCTTTCAAGATATATTTCGAAGTAGCATTTTTAACCCAGGGAAGTATGGATATACCAATCATAATGAACATATCAAAGTGGAAGAGGAACCATTTTACAGTTCTCAACTAGCAGTATCAATCACACACAGTCAGGAGTTATCCAACTCGAGCTGTGCTCTCTCTCTTCTGTCAGCCCAGGCACAAGATCTGTCGCACCCCTCGGTAGGGAATTCCATGGGCACTTCCCTAAGTTTTCAGGGCATCTGCTCAAGCCGCAATGATAGCCAAGTTTCTGAAATGCCTTTGGGGATAAGATCCATGGATAAATATGTACAAAATGAGTCCTTTTCATGTGGGGTAAACTCTATGGATGTTAAGAATGGAGCTCTAGTGCTTTCTGAGGCTGGTCATTCTCTTCGAGTCCGTAGAGATGATATTTCTCAATCATCAGACTCATCAAATGCCAAATATCACTTTACCCCTGAACATGGAACCACTGTTGATCTGTTCCAATTGTCATCGCATCTTCAAAGGGTGGAGCAACAAAGAAATTCCTTCTCAGTAAAGCAGCAAAATGAGGATTGCTGTTTCCCAACTGTGTAAAAAGTGTTAAGACTCTAGTTTCATTGACAACCATTTTGTTAGTATCTATATTTTGATGCTTTTGTAGTGGGACTGTTTTCCCAGCAAATTGATTCATTTGTGATGAATCAATGGTGGGTAGGGAAGTTAGGGATACTCTAGCAATAGTAGTGGTCCTAGTGGATGTTCAAACTTCA 1622 0.4075 MESWSYTPEEKSYLFSEEMDFSLDAFLRTRKALVEWDNKATGNFEKDGFISDVEVVKSMEFVDLGFPDLFRKSFHGSQPLETSSYDLDSNSSKIVNTSTHVVALDSSLGEEESESKHSSPLVKSKSHDSSLIDLKLGRLADCKEASSNEFVKEGLALSSIPSRALAKRARTSSSPTQKPVCQVYGCNMDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPYKMLQSYQGAKYLGASLQKRPQFAFQDIFRSSIFNPGKYGYTNHNEHIKVEEEPFYSSQLAVSITHSQELSNSSCALSLLSAQAQDLSHPSVGNSMGTSLSFQGICSSRNDSQVSEMPLGIRSMDKYVQNESFSCGVNSMDVKNGALVLSEAGHSLRVRRDDISQSSDSSNAKYHFTPEHGTTVDLFQLSSHLQRVEQQRNSFSVKQQNEDCCFPTV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01387 481 Gene3D - 171 242 IPR036893 GO:0003677|GO:0005634
Bach4g01387 481 FunFam Squamosa promoter-binding-like protein 14 172 242 - -
Bach4g01387 481 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
Bach4g01387 481 SUPERFAMILY SBT domain 179 260 IPR036893 GO:0003677|GO:0005634
Bach4g01387 481 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 118 256 IPR044817 GO:0003677
Bach4g01387 481 Pfam SBP domain 181 254 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01387 Bach-Chr4 9741423 9745741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01387 132 479 SBP-box Gene Family AT1G69170 38.400 5.09e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach4g01387 SBP 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01387 - - gmx:100797372 616.69