Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01380 ATGGCGGCAATGCAAGGTGTGCAGAAGAACACCCTCTACGTGGGTGGGTTGGCGGAGGAGGTCAACGAGTCAATCCTTCATGCGGCCTTCATACCCTTTGGGGACATTAAGGATGTGAAGACGCCGCTTGATCAAGCGACCCAGAAGCACCGTTCTTTCGGCTTCGTCACTTTCTTAGAAAGGGAGGACGCTGCCTCCGCTATGGACAACATGGATGGTGCTGAGCTTTATGGACGTGTGCTTACCGTCAATTACGCCCTGCCGGAGCGCATAAAGGGTGGTGAACAGGGTTGGGCTGCTCAGCCAATTTGGGCGGATGCGGATACTTGGTTTGAGAGGCAGCAGCAAGAAGAGGAGATGCGTCGAATTGAGGCTGAGAATCAAGCTTCAATGCAGGCTGCAGAAGAGTTGCGCAGAAAAAAATTGGCCCAAGAGCGAGAGGGAGAAAAAGAGGAGGAAATTGACATCAAGGATGATCCCATCGCAAAGGCTGAAGCAGAGGCTCTGAAAGAAAATAGTTAG 522 0.5211 MAAMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAASAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMRRIEAENQASMQAAEELRRKKLAQEREGEKEEEIDIKDDPIAKAEAEALKENS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01380 173 SMART rrm1_1 11 84 IPR000504 GO:0003723
Bach4g01380 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 10 88 IPR000504 GO:0003723
Bach4g01380 173 PANTHER ATPASE E1 3 172 - -
Bach4g01380 173 Gene3D - 2 153 IPR012677 -
Bach4g01380 173 Coils Coil 113 154 - -
Bach4g01380 173 MobiDBLite consensus disorder prediction 133 173 - -
Bach4g01380 173 SUPERFAMILY RNA-binding domain, RBD 7 97 IPR035979 GO:0003676
Bach4g01380 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 12 81 IPR000504 GO:0003723
Bach4g01380 173 CDD RRM_PPIE 12 86 IPR034168 GO:0003723
Bach4g01380 173 FunFam Peptidyl-prolyl cis-trans isomerase 2 155 - -
Bach4g01380 173 MobiDBLite consensus disorder prediction 121 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01380 Bach-Chr4 9691087 9692553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01380 10 88 Eukaryotic Initiation Factors Gene Family AT3G11400 37.975 2.33e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01380 - - mcha:111005196 291.197