Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01344 ATGTTTGGGTTTAGGAAATCACCAGCCAAGGCTCCTGATTCAGAAAATGAATCAAATAAAACGGCAGCTGCAAGAAGAACTTCTTCAGAACCTACGCTCATAACGCCAAAGGATGATGATGACTATAAAAATGGTTTCCGTGACTCAGGAGGGCTACAGAACCAGAGTGTCCAAGAGCTGGAGAAGTATGCTGTCTATAAATCTGAGGAGACAACAAAGAGTGTTAACAATTGCCTGAGGATAGCTGAGGACATCAGAGAAGATGCCACAAGGACACTTGACATGTTGCATCAGCAGGGTGAGCAAATTACAAGGACTCACAACATGGTTGTTGAAACAGATAAGGATTTGAGTAAGGGTGAGAAACTCCTAAATAATCTTGGGGGCATGTTCTCTATGCCTTGGAAGCCAAAAAAGACTAAGGAAATTCAAGGACCAGTTATTACACCAGATAACTCAACCAAGAAGAATATAAAGAATAAGGAAGATAGGGAAAAATTGGGCTTAGCTCCTTTGCCTAAAGGCAAGTCTGCACCTGCAACACCTCAAAATGAACCAGCAGATACTTATCAGAAAATTGAGATGGAGAAGACAAAACAAGATGATGCACTCTCAGATCTCAGTGATATCTTGGGTGATTTGAAGGGTATGGCAATTGGCATGGGAACTGAACTTGACAGACAAAATAAAGCTCTTGATCATCTCAGTGACGATGTGGATGAGTTGAACTCTCGAGTTAAAGGAGCCAACCAACGTGCACGCAAATTGCTGACTTGA 777 0.4196 MFGFRKSPAKAPDSENESNKTAAARRTSSEPTLITPKDDDDYKNGFRDSGGLQNQSVQELEKYAVYKSEETTKSVNNCLRIAEDIREDATRTLDMLHQQGEQITRTHNMVVETDKDLSKGEKLLNNLGGMFSMPWKPKKTKEIQGPVITPDNSTKKNIKNKEDREKLGLAPLPKGKSAPATPQNEPADTYQKIEMEKTKQDDALSDLSDILGDLKGMAIGMGTELDRQNKALDHLSDDVDELNSRVKGANQRARKLLT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01344 258 SUPERFAMILY SNARE fusion complex 55 126 - -
Bach4g01344 258 MobiDBLite consensus disorder prediction 14 31 - -
Bach4g01344 258 FunFam SNAP25 homologous protein SNAP33 51 128 - -
Bach4g01344 258 SMART tSNARE_6 60 127 IPR000727 -
Bach4g01344 258 SMART tSNARE_6 189 256 IPR000727 -
Bach4g01344 258 MobiDBLite consensus disorder prediction 1 54 - -
Bach4g01344 258 FunFam SNAP25 homologous protein SNAP33 191 258 - -
Bach4g01344 258 SUPERFAMILY SNARE fusion complex 189 257 - -
Bach4g01344 258 MobiDBLite consensus disorder prediction 155 170 - -
Bach4g01344 258 Gene3D - 177 258 - -
Bach4g01344 258 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 194 256 IPR000727 -
Bach4g01344 258 Coils Coil 225 258 - -
Bach4g01344 258 Gene3D - 51 129 - -
Bach4g01344 258 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 14 257 - -
Bach4g01344 258 CDD SNARE_Qc 199 255 - -
Bach4g01344 258 CDD SNARE_SNAP25N_23N_29N_SEC9N 62 126 IPR044766 GO:0005484|GO:0031201
Bach4g01344 258 MobiDBLite consensus disorder prediction 32 46 - -
Bach4g01344 258 Pfam Snare region anchored in the vesicle membrane C-terminus 71 125 - -
Bach4g01344 258 MobiDBLite consensus disorder prediction 135 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01344 Bach-Chr4 9433666 9435555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01344 184 252 SNARE and Associated Proteins AT3G09740 40.580 9.86e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01344 K18211 - gmx:100804448 402.519