Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01329 ATGACTGGCAGAAGCAAGGTGAAGCTGCAGCTCATAGCCAATGAGTACACAAGGAAGAAAACCTTCAATAAGAGGAAGAAGAATCTGATGAAGAAGGCAGTTCAACGGAGCACCCTTTGTGGGACCGATATGTGCGCCATAGTATTCAGTCCTTATGATTCTGCACCAGAGGTTTGCCCATCAGCATCAGCAGTCCAAAGGGTGGTGAGCAGGTTCAAGAAAATGCCACAAACGGAGCAGAGGAAGAAGATGATGAACCAAGAGAGTTTCATGAAGGAGAGAATCTTGAAGGGCAAAGAGAAGTTGAAAAGAAAGATTAGGGAAAACTATGAGATGGAGATGACCCACGTTATGTTTCAGTGCCTTGATGCAGGGGAGCTTCCCCAATATATCAGCATTAAAGATTTGGATTTTCTGGAATGGCTGATTGACAGTAAACTCAGTAGAATCACCAGAAGGATGGAGGCACTGGAAAACAGCCATGGCCAAACCCAAGCCCAAGTGGTGGCTTCAAAAAAGAAGCAGATGTAA 531 0.4501 MTGRSKVKLQLIANEYTRKKTFNKRKKNLMKKAVQRSTLCGTDMCAIVFSPYDSAPEVCPSASAVQRVVSRFKKMPQTEQRKKMMNQESFMKERILKGKEKLKRKIRENYEMEMTHVMFQCLDAGELPQYISIKDLDFLEWLIDSKLSRITRRMEALENSHGQTQAQVVASKKKQM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01329 176 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 12 52 IPR002100 GO:0003677|GO:0046983
Bach4g01329 176 ProSiteProfiles MADS-box domain profile. 2 50 IPR002100 GO:0003677|GO:0046983
Bach4g01329 176 SMART madsneu2 2 61 IPR002100 GO:0003677|GO:0046983
Bach4g01329 176 Gene3D - 14 98 IPR036879 GO:0003677|GO:0046983
Bach4g01329 176 Coils Coil 147 167 - -
Bach4g01329 176 CDD MADS_SRF_like 3 86 IPR033897 GO:0000981|GO:0000987|GO:0045944
Bach4g01329 176 PANTHER SERUM RESPONSE FACTOR HOMOLOG 4 156 - -
Bach4g01329 176 PRINTS MADS domain signature 24 39 IPR002100 GO:0003677|GO:0046983
Bach4g01329 176 PRINTS MADS domain signature 39 60 IPR002100 GO:0003677|GO:0046983
Bach4g01329 176 PRINTS MADS domain signature 4 24 IPR002100 GO:0003677|GO:0046983
Bach4g01329 176 FunFam Agamous-like MADS-box protein AGL80 14 99 - -
Bach4g01329 176 SUPERFAMILY SRF-like 3 96 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01329 Bach-Chr4 9330841 9331371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01329 4 176 Type I MADS-box Gene Family AT5G48670 47.727 6.41e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach4g01329 SRF-TF 7.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01329 - - gmx:100813231 177.178