Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01321 ATGACCAAAAGAAGAAGAAGAAGAAAAGAAGAAGCCGATGAAGAGAAGAACAAGAATGATGAGAACACTGACTTAGAGAAGCTAAGAGAAGAAGCAGCAGCAGTTACAGCTGCTCTAGTTGGAGCAAGAAGAGCACGAAAACGGTTCGTTGGGGTGCGCCAAAGGCCTTCAGGAAGATGGGTTGCTGAGATCAAAGACACCATACACAAGATAAGACTATGGTTAGGCACTTATGACACTCCAGAAGAGGCTGCAAGAGCTTATGATGAAGCAGCTTGTTTGCTTCGAGGATCCAATACTCGCACAAATTTCGGGCCTTGCCCCCCATCTCCCACAAATCCAGCTCTTCCCTCAAAGATTGCTAATCTTCTCCTTCTTAGGCTAAAAGCCAGAAACAATGCCTCTGCTTCTGCAGTTACTCCTCCTTTTCCTGCCAGCCCATATGAGCCTCCTTTTCCTGCTAGCCCATATGAGCAGAAAGCACAACTTGAGGTACCTCGGTTCGACAATTTTCTGGGTTTGCGAGAAACACAGTGTTATGGACTTTCAAGTTATGCAGATGATTTTCTTGGCATGCCAGAAAATGGGAGTGTTGCAGAAAGTTATGATGATGTTAGTTATAGTTCTGGCGCCATAACTAGCAGTGACTATAGTTATGGAAGTGCTGAAGTAAATTTTAACCAAGAGGGTTGTGCAGAGAAATTTTATTTAAAGTGTGATGGTGCTGGCAATGCTGATTATGCTAACAATGGGATTATGAATGAAAAAAGAGCATTTGGAGACTCTGAAATGGGGCTCATCGACTTCCAGTTCGTAGACAATGGGGAACCAATTGGTTACTCTTCTCCATTTGAGGTAGCAGAGGAGATGGTGGGGCCAATAGAGGAAGAAAATTACGGGGATGAGCCACCATTTATGATCGAAACAATGAAGATGATGAAGTACGAACGCAAAGTCTCAGCTTGTCTTTACACCTTCAATGGGGTGTCTGAGTGTTTGAGATTGAAACTAGGATCTGAGAATGCAAACGGGGATGAATTTTTTTATGGATAA 1053 0.434 MTKRRRRRKEEADEEKNKNDENTDLEKLREEAAAVTAALVGARRARKRFVGVRQRPSGRWVAEIKDTIHKIRLWLGTYDTPEEAARAYDEAACLLRGSNTRTNFGPCPPSPTNPALPSKIANLLLLRLKARNNASASAVTPPFPASPYEPPFPASPYEQKAQLEVPRFDNFLGLRETQCYGLSSYADDFLGMPENGSVAESYDDVSYSSGAITSSDYSYGSAEVNFNQEGCAEKFYLKCDGAGNADYANNGIMNEKRAFGDSEMGLIDFQFVDNGEPIGYSSPFEVAEEMVGPIEEENYGDEPPFMIETMKMMKYERKVSACLYTFNGVSECLRLKLGSENANGDEFFYG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01321 350 FunFam ethylene-responsive transcription factor RAP2-11 47 106 - -
Bach4g01321 350 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Bach4g01321 350 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Bach4g01321 350 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Bach4g01321 350 CDD AP2 47 104 IPR001471 GO:0003700|GO:0006355
Bach4g01321 350 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Bach4g01321 350 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 318 - -
Bach4g01321 350 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Bach4g01321 350 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Bach4g01321 350 MobiDBLite consensus disorder prediction 1 25 - -
Bach4g01321 350 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Bach4g01321 350 Coils Coil 11 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01321 Bach-Chr4 9273722 9274774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01321 46 124 AP2-EREBP Transcription Factor Family AT5G19790 72.152 1.53e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach4g01321 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01321 K09286 - qsa:O6P43_025506 278.485