Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01307 ATGGGTAGGTCTCCATGTTGTGAGAAAGTGGGGTTGAAGAAAGGGCCATGGATTCCAGAGGAAGACCAGAAGCTCATGGCTTACATCGAAGAACATGGCCATGGAAGCTGGCGTGCATTGCCTGCCAAAGCTGGGCTTCAGAGATGTGGGAAGAGTTGCAGATTGAGGTGGACTAATTATCTTAGATCTGATATAAAGAGAGGGAAGTTCAGCTTGCAGGAAGAGCAAACGATTATTCAACTCCATGCTCTTCTTGGAAACAAATGGTCAACTATAGCAGCCCACTTACCCAAGAGAACTGACAATGAGATCAAGAATTACTGGAACACCCACCTCAAGAAGAGACTAACCAAAATGGGCATAGACCCCATCACCCACAGGCCCAAAACGGACGCCTTCGGCCACTCCAAGGATGTCTCCAATCTGAGCCACATGGCTCAGTGGGAAAGCGCTCGGCTGGATGCCGAAGCCAGATTAGTCCGAGAATCTAGGTTGCAGATGGTCCAGAACCAGCTCGGCTCCAGCTCCTCCAAGCCAGCTCGGCTCATCCTCAACAAAATCTCACCCCAACCTGCAGTTCCACCGTGCCTAGATGTTCTCAAAGCATGGCAGCGTTCATGGTCGAACAATTCACAATCAAACAAAGATCACCCTAGAATGCATAACATTTACGCCATGAAGCTCACCACCGACGACCTCGAGTCGCCGACGTCCACGTTGTGCTTCCCTGAATGCACGTCTCCACTTCCTATCTCAACCACCACAGGGACAATATTCAACAACAACTTACTTCCTTCCACAACCACAGCTCCGGCCACCGCGAAAAGCTCAGCCTCATGCGAGGGTGACGATAATGGGTCGTGGAAATGTTTGCCTAAAGAAGTGGAACTTAGTGAGAAAGGAGTGGATAACAGAGTGTTAAACTTGCAAGACGACAACATTATGATGGCTGTGGAAGCATTCAGAGCTGCAGCAGCAGGATATAACTCTAATAACATGGAAGATTGTCTCAATGATGATTTGCTCTATGATCCCAATGAAGGTTTAGCGGCAGAAGAAGACAACCTGGGAATCATCAATGGGGATGGAAGCAACAGTAGCGTGAACTTTGAGGAAAATAATAAGCATTATTGGAACAGCTTGCTGAACTTGGTCAATGATTTGCCTTCTGGGTCGTCGGTGTTCTGA 1188 0.4823 MGRSPCCEKVGLKKGPWIPEEDQKLMAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRSDIKRGKFSLQEEQTIIQLHALLGNKWSTIAAHLPKRTDNEIKNYWNTHLKKRLTKMGIDPITHRPKTDAFGHSKDVSNLSHMAQWESARLDAEARLVRESRLQMVQNQLGSSSSKPARLILNKISPQPAVPPCLDVLKAWQRSWSNNSQSNKDHPRMHNIYAMKLTTDDLESPTSTLCFPECTSPLPISTTTGTIFNNNLLPSTTTAPATAKSSASCEGDDNGSWKCLPKEVELSEKGVDNRVLNLQDDNIMMAVEAFRAAAAGYNSNNMEDCLNDDLLYDPNEGLAAEEDNLGIINGDGSNSSVNFEENNKHYWNSLLNLVNDLPSGSSVF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01307 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 208 - -
Bach4g01307 395 CDD SANT 69 112 IPR001005 -
Bach4g01307 395 CDD SANT 16 61 IPR001005 -
Bach4g01307 395 FunFam MYB-related transcription factor 13 66 - -
Bach4g01307 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach4g01307 395 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach4g01307 395 Gene3D - 69 116 - -
Bach4g01307 395 FunFam MYB transcription factor 69 116 - -
Bach4g01307 395 SMART sant 13 63 IPR001005 -
Bach4g01307 395 SMART sant 66 114 IPR001005 -
Bach4g01307 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach4g01307 395 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach4g01307 395 Gene3D - 13 66 - -
Bach4g01307 395 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach4g01307 395 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach4g01307 395 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01307 Bach-Chr4 9178700 9180122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01307 1 179 MYB Transcription Factor Family AT5G15310 77.049 3.42e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach4g01307 Myb_DNA-binding 4.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01307 K09422 - gmx:100809025 468.774