LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g01296	ATGATAATCGAGGTCTCTTTCCTAACTCTTGTCTCTCAATCATCCCCTAACTCATTTTCAAAACCATTTCAAAACCCTAACTTTAATCTGAGAAGACCCTTCTTCACTTCCTTCAATGGCTCTTCACCCTTCAGATCCCTCATCCAATTTTCCCGCCAAGCAGAAGCACCTCCTCTTTCCACCTCCGACCCCGGCCTCCTTTTCCGGGAAAAAATAATCTACCTCGAGAAACTCAATGTTAATCCCCGCAAAGCTCTCCGAAAAAACCCCAATTTTCGATCAGCTCCACTCTCCTCTCTCAAATTCGTAGAGGATTGCCTCTCCTCCATGGGCATCGAGCGCTCTGCAATGGGTCGGATCCTCGACATGCACCCCCAGCTGCTTACCTGCGACCCCCATTACGATCTCTACCCCATATTGGATTTCTTGTTGAATGAGGCAAAAATCCCATTCCCTGATATTCGGAAATCGATCATACGGTGCCCAAGGTTGTTAGTTTGCAGCGTGGACGAACAGCTGAGACCTGCATTGTTATTCCTGAGGAATTTGGGGTTTGCGGGTTCGAATTCCATCAATTCCCAGACTGCATTGCTGATGGTCTCAAGTGTGGAAACTACCCTTTTGCCAAAAATTCAATATTTACAGAGTCTGGGCTTTACTTATGAGAAAGTGGAGATGAATGGGGATATAGCTGAATTGAAGAGGTTTCCACAATATTTTTCATATAGTTTGGAGGGAAAAATTAAGCCAAGGCATAGACTATTACTCAAGCAAGGGTTCTCGCTTCCATTGGCGGAGATGTTGAAGGTTAGTGATGGTGAATTTAATGCTAGGTTACTTGAAAAGCGACTACGGTCACTTGAGGGAGGGTAGTTGTTGTAAATTGCTTGTTCCTTACAATTGTATACTAAGCTGAGAGATAGTGAAATTTCATTGTTTCCGCAAATTACATATATGTATATATGTATTTTGTTTG	976	0.4334	MIIEVSFLTLVSQSSPNSFSKPFQNPNFNLRRPFFTSFNGSSPFRSLIQFSRQAEAPPLSTSDPGLLFREKIIYLEKLNVNPRKALRKNPNFRSAPLSSLKFVEDCLSSMGIERSAMGRILDMHPQLLTCDPHYDLYPILDFLLNEAKIPFPDIRKSIIRCPRLLVCSVDEQLRPALLFLRNLGFAGSNSINSQTALLMVSSVETTLLPKIQYLQSLGFTYEKVEMNGDIAELKRFPQYFSYSLEGKIKPRHRLLLKQGFSLPLAEMLKVSDGEFNARLLEKRLRSLEGG	290

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g01296	290	Coils	Coil	277	290	-	-
	Bach4g01296	290	SMART	mt_12	83	113	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	SMART	mt_12	189	220	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	SMART	mt_12	155	186	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	SMART	mt_12	230	261	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	SMART	mt_12	118	150	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	PANTHER	CGI-12 PROTEIN-RELATED	79	222	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	Gene3D	Transcription termination factor 3, mitochondrial	51	287	IPR038538	-
	Bach4g01296	290	Pfam	mTERF	223	275	IPR003690	GO:0003690\|GO:0006355
	Bach4g01296	290	Pfam	mTERF	106	223	IPR003690	GO:0003690\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g01296	Bach-Chr4	9099282	9100341	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Bach4g01296		mTERF	9.7e-11	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g01296	K15031		-	qsa:O6P43_032999	380.563