Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01288 CGCTTGTTTCCTTTGTGAGGAAGACTCTATTTTTGTTTTCATCGATGGCTTCTGAAACTGAGGCGTCTGAGGTTTCCTCATTGATCGAGAGGATGATGAGGAACAGAGACATCTCTCTGTTTCTACCCTTTTTCTTTGGCTTCTCAAACGCTTCATCCAGAAGAGATGGTGAAGACCCAGATCAGGAAACTGAGGGTACTGAAAGTTCCCAGCGTGAGAGAATAATCTTGATAAACCCATTCACCCAAGGGATGATTGTGGTTGACGGCGCTTCAAGCCTTGAGGCTCTGTTTCGTGAACTGGGAAGTAAGGGTGGGCAACCTCCAGCTTCCAAGGAATCCATAGATGACATGCCAAGTGTTGAGATTGGTGAAGGTGAAGATGGGGAGTGTGTAATATGTTTGGAGGAGTGGGAGGTTGGTGGAGTGGCAAAAGAGATGCCTTGTAAGCATAAATTTCACCCCAATTGTATTGAGAAGTGGTTGTGTATTCATGGTTCTTGCCCAGTTTGCAGGTATCACATGCCTGTGGATGAGAAAGATGTGGGGAAGAACAGAGATGAAGAAGGGGGAGAGAGGAGGAGGGGTGACAGAGAAGTGTGGGTTAGTTTCTCTTTCAATGGGAGTAGGAGAACTGAGGATTCAAATCAAGCTCCTTCAGCTGATTCCATTGTTTCTCCATCAAGTCCCAGAAGTGATCCTGATGTAGAAAGTTAGATGGCTTCTGAAACTGAGGCGTCTGAGGTTTCCTCATTGATCGAGAGGATGATGAGGAACAGAGACATCTCTCTGTTTCTACCCTTTTTCTTTGGCTTCTCAAACGCTTCATCCAGAAGAGATGGTGAAGACCCAGATCAGGAAACTGAGGGTACTGAAAGTTCCCAGCGTGAGAGAATAATCTTGATAAACCCATTCACCCAAGGGATGATTGTGGTTGACGGCGCTTCAAGCCTTGAGGCTCTGTTTCGTGAACTGGGAAGTAAGGGTGGGCAACCTCCAGCTTCCAAGGAATCCATAGATGACATGCCAAGTGTTGAGATTGGTGAAGGTGAAGATGGGGAGTGTGTAATATGTTTGGAGGAGTGGGAGGTTGGTGGAGTGGCAAAAGAGATGCCTTGTAAGCATAAATTTCACCCCAATTGTATTGAGAAGTGGTTGTGTATTCATGGTTCTTGCCCAGTTTGCAGGTATCACATGCCTGTGGATGAGAAAGATGTGGGGAAGAACAGAGATGAAGAAGGGGGAGAGAGGAGGAGGGGTGACAGAGAAGTGTGGGTTAGTTTCTCTTTCAATGGGAGTAGGAGAACTGAGGATTCAAATCAAGCTCCTTCAGCTGATTCCATTGTTTCTCCATCAAGTCCCAGAAGTGATCCTGATGTAGAAAGTTAGACGAGAATTTTTGTAAGAAATATTTTTTTTCTCCTTTTGTTAAAGAATCTGTATAGGCATAAATCCTCAAAAGCTTTATCATAATAATATCCTGCCATCTCCA 1491 0.4494 MASETEASEVSSLIERMMRNRDISLFLPFFFGFSNASSRRDGEDPDQETEGTESSQRERIILINPFTQGMIVVDGASSLEALFRELGSKGGQPPASKESIDDMPSVEIGEGEDGECVICLEEWEVGGVAKEMPCKHKFHPNCIEKWLCIHGSCPVCRYHMPVDEKDVGKNRDEEGGERRRGDREVWVSFSFNGSRRTEDSNQAPSADSIVSPSSPRSDPDVES 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01288 223 MobiDBLite consensus disorder prediction 39 55 - -
Bach4g01288 223 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 48 161 - -
Bach4g01288 223 ProSiteProfiles Zinc finger RING-type profile. 116 157 IPR001841 -
Bach4g01288 223 MobiDBLite consensus disorder prediction 87 106 - -
Bach4g01288 223 Pfam Ring finger domain 115 157 IPR001841 -
Bach4g01288 223 SUPERFAMILY RING/U-box 107 163 - -
Bach4g01288 223 MobiDBLite consensus disorder prediction 37 57 - -
Bach4g01288 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 163 IPR013083 -
Bach4g01288 223 SMART ring_2 116 156 IPR001841 -
Bach4g01288 223 FunFam E3 ubiquitin-protein ligase RNF181 84 163 - -
Bach4g01288 223 MobiDBLite consensus disorder prediction 191 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01288 Bach-Chr4 9025076 9025894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01288 1 208 C3H Transcription Factor Family AT1G26800 53.052 1.57e-68 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01288 4 9025076 9025894 Bach4g01288 4 9025076 9025894 ECH