Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01282 ATGAACGGGTCGTCTACGCGGCAAGCGACGTGTCAAATGACTAGAATGTCCTCGTATAACGAAAACGCGGAGCACACAGTCTTTGCATTTGTCTCTTTTCTTCCTTCTCGCACGCTCAACCATAGCCCACGCTATTCTTCATTGTCTCCACTATTTCACCATTTTCCTGGAGAAGGATCAATGAGCGATCATTTGGTGTTGTTTGTGGACCGTCTTGTACGGCCTGTGCCCGTTGAATCGGTGACCCAAGCGGCTGAGGTGCCTCCGGAGCCGGCTGCAAGTGGTGGGTCCGTGGATGCTGCTGGGCCGTCTGGTTCAGCACCTCCGGCGGATGATGCTCGGTCGGAGCATGGTGAGGATAATGAGGACGAGCCGCTGATCCAGTCTGCGGAATGTCGCATTTGCCAAGAGGAGGACAGCACTAAGAATTTGGAGACGCCATGTGCTTGCAGCGGCAGTCTGAAGTATGCTCACAGAAAGTGTGTCCAGCATTGGTGCGATGAGAAAGGAGACATAACTTGTGAAATATGTCATCAGCCTTATCAACCTGGTTATACTGCTCCACCTCCACGTCCTAATCCTGAAGAAACTACCATTGATATAGGTGGAGGCTGGACAATCTCTGGGACACCTTTGGACTTGCGTGATCCTCGACTCTTGGCGATTGCAGAGGCAGAGCGTCAGTTCTTGGAAGCTGAATATGACGAGTATGCTGCATCTAATGCCAGTGGAGCTGCATTTTGCCGTTCAGCTGCTCTGATTTTAATGGCCCTTTTACTCTTGCGGCATGCACTGTCTGTCACAGATTCTGATGCTGATGATGATCCATCAACTTTTTTCTCTCTTTTCTTACTTCGAGCAGCTGGATTTCTTTTACCTTGTTATATCATGGCTTGGGCAATCAGTATTTTGCAACGTCGGCGGCAAAGACAGGAGGCAGCAGCACTGGCGGCGACTCAAGTTGCTTTTGTTCTACAATCTGGGCAGCGTAGGGGTCTGCAGTTTGCGATAGCACCGGGGCCACCAACAGTGAATACACACCAGGAAGTGGAGAATGTTTAATTTGTCGTTTGCCTCCTATGTTGTAAGGATGGATCCCTTGGCGTGTGTGCCATAAAAAGAAGGCTAGTTGAAATGCCATTCGGTCTTTGATTTTCACAGCTCTACTGTGCATGTATATACCTTTAGCTTGAGCTTGAGCGGCTTTAAGATGATTGCTTCTGTATCTTGGTTTGATTCCGTAGCCTTTAACAACAAACCTCTCAACATCTCCATTGATCCTCTTTCATCAATTCATCAATATTAAAA 1308 0.4839 MNGSSTRQATCQMTRMSSYNENAEHTVFAFVSFLPSRTLNHSPRYSSLSPLFHHFPGEGSMSDHLVLFVDRLVRPVPVESVTQAAEVPPEPAASGGSVDAAGPSGSAPPADDARSEHGEDNEDEPLIQSAECRICQEEDSTKNLETPCACSGSLKYAHRKCVQHWCDEKGDITCEICHQPYQPGYTAPPPRPNPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDSDADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPGPPTVNTHQEVENV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01282 353 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 61 311 IPR033275 -
Bach4g01282 353 SUPERFAMILY RING/U-box 129 182 - -
Bach4g01282 353 Coils Coil 220 240 - -
Bach4g01282 353 CDD RING_CH-C4HC3_MARCH 132 178 - -
Bach4g01282 353 MobiDBLite consensus disorder prediction 82 125 - -
Bach4g01282 353 ProSiteProfiles Zinc finger RING-CH-type profile. 124 184 IPR011016 GO:0008270
Bach4g01282 353 Pfam RING-variant domain 132 177 IPR011016 GO:0008270
Bach4g01282 353 SMART ringv_2 131 178 IPR011016 GO:0008270
Bach4g01282 353 Pfam Protein of unknown function (DUF3675) 183 301 IPR022143 -
Bach4g01282 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 187 IPR013083 -
Bach4g01282 353 FunFam RING/FYVE/PHD zinc finger protein 120 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01282 Bach-Chr4 8972943 8976153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01282 120 207 C3H Transcription Factor Family AT2G37950 34.000 8.54e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01282 - - gmx:100779674 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01282 4 8972943 8976153 Bach4g01282 4 8972943 8976153 ECH