Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01281 ATGGACTTGACCCCAAGCAGCACCCACACCTTAGATACGGATACTCAAACCCCACCACCGACCCATCTCACCAACAACACCAAGTCTTTGTCTTTCACCAACGGCACCCTCAAGCGCCATCAACAATTAGCCCCACCACTCCCACAGCCACCACATATGGTGGTTTCCTACAAGGAATGTCTCAAGAACCATGCCGCCACCATAGGTGGCCACGCCCTTGACGGCTGCGGTGAGTTCATGCCTTCACCCACTTCTAACCCCAGTGACCCTCGCTCCTTAAAATGCGCCGCATGTGGCTGTCACCGCAACTTCCATCGCCGTGACCCACAAGAATTTGCTAACCCCAATTTCATCAACTGCTTCTACTCGCCGGGAGCTGCAGCCCCGCCACCGCCTCTTCAACCGCACCGGGGGTTGAGCCCTAGTACGAGTCCAAGCATGAGCACAAGCCCAAGTCCGAGTCCAAGCCCCATTTCTAGCCCTTCACCGCCACCGGTTTCGCATTTTCCACCTTCGTTTCATGCATCGGCACCTCACATGTTGTTAGCGCTGGGCACCGCGTACTCTGGGCCTTCCGATGAGCAGTACCGGAATTTTAATTCCACAGTGACGAAGATGGAAACCCCAAGTGGGAAAAAGAGGCACAGAACGAAATTTAGCCAGGAGCAGAAGGAGAAGATGCGTTTGTTTTCTGATAAATTGGGGTGGAAAATGCAGAAAGGGGATGAAAGATTGGTGCAGGATTTCTGCAATGAGTTGGGTGTTTCAAGAGGGGTTTTCAAGGTTTGGATGCACAACAACAAGCACACTTCCAGGAAGAGATCAGAAATGGGTAATGCTCCTCAGAGTGAGAAAATCGATGAGGAGGAGGATAATGATAATGGCAATGGCACTGGTAGAGGTGGCTTTGATCATGATATTAACAATCCTCAGAACAACACAAATAGCAGCAACAATGACATCCACAGAAATGAAGATAGCTCTGTGAATCTTCATGTTTCCGTTAATGGGTCTTCTTCTTAA 1023 0.5034 MDLTPSSTHTLDTDTQTPPPTHLTNNTKSLSFTNGTLKRHQQLAPPLPQPPHMVVSYKECLKNHAATIGGHALDGCGEFMPSPTSNPSDPRSLKCAACGCHRNFHRRDPQEFANPNFINCFYSPGAAAPPPPLQPHRGLSPSTSPSMSTSPSPSPSPISSPSPPPVSHFPPSFHASAPHMLLALGTAYSGPSDEQYRNFNSTVTKMETPSGKKRHRTKFSQEQKEKMRLFSDKLGWKMQKGDERLVQDFCNELGVSRGVFKVWMHNNKHTSRKRSEMGNAPQSEKIDEEEDNDNGNGTGRGGFDHDINNPQNNTNSSNNDIHRNEDSSVNLHVSVNGSSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01281 340 Gene3D - 199 273 - -
Bach4g01281 340 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 57 108 IPR006456 -
Bach4g01281 340 MobiDBLite consensus disorder prediction 305 340 - -
Bach4g01281 340 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 29 270 - -
Bach4g01281 340 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 57 108 IPR006456 -
Bach4g01281 340 MobiDBLite consensus disorder prediction 128 171 - -
Bach4g01281 340 MobiDBLite consensus disorder prediction 269 285 - -
Bach4g01281 340 Pfam ZF-HD protein dimerisation region 55 109 IPR006456 -
Bach4g01281 340 MobiDBLite consensus disorder prediction 205 224 - -
Bach4g01281 340 MobiDBLite consensus disorder prediction 148 171 - -
Bach4g01281 340 NCBIfam homeobox domain, ZF-HD class 212 268 IPR006455 -
Bach4g01281 340 SUPERFAMILY Homeodomain-like 207 273 IPR009057 -
Bach4g01281 340 MobiDBLite consensus disorder prediction 1 31 - -
Bach4g01281 340 MobiDBLite consensus disorder prediction 269 340 - -
Bach4g01281 340 MobiDBLite consensus disorder prediction 208 224 - -
Bach4g01281 340 FunFam Zinc-finger homeodomain protein 2 199 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01281 Bach-Chr4 8958927 8959949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01281 43 270 ZF-HD Transcription Factor Family AT1G69600 49.785 5.70e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach4g01281 ZF-HD_dimer 6.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01281 4 8958927 8959949 Bach4g01281 4 8958927 8959949 ECH