Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01276 ATGGATGAGAGAAATGATACTGAGAAACTTGATGAAGTTGTGCTACCTGGGTTTAGGTTTCATCCAACTGATGAGGAGCTTGTTGGGTTTTATCTTAGAAGAAAGACTCAGCAGAGGCCTCTGTCAATCGAGCTCATCAAGCAGCTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGTTGGCCTGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCCACAGGAACTGATAGGCCTATTTACTCCTCTGAGTGTTCAAAGTGCATTGGGTTGAAGAAATCCCTTGTTTTCTACAAAGGTAGAGCAGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCCGCTTGCCTTCTCTCACAGACTCATCTTCACCAAAGAAGTACATAGACAAGACCATACCAGCTAATGATTCATGGGCAATATGCAGGATATTCAAGAAAACTAATTCCACAGCTCGAAGAGCTCTTTCTCACTCTTGGGTCTCTCCTTTGCCTGAAACATACACCTCTGATTTGCTAACCAAAGATGAAAACAGTCCTCAGTTTTGTTCAGAGCCACTGACAAAGAAAACTGGCTTGACCAGCCAGTTTCATACTAACCACAGTGACATACAACACTTAAACAGTAGCAATAGCCCTCTGTGTGGCTTAGATATTGGTTCTTACAGACCCATCGTGAATCCATTGCTTTACAAACCCTTTGATCAATTGCCCATTTCAAATGGGGAATCTAACACTAGCTTAATGTTTTCATCTGCCCATGAAACGTCCACTGCTACTGCCAAATCCTCAGTTGATGTTTCTTCCATGTTGCTGAATATGTCATCATCTATGCTAGGAGATTTTGGTAAGGCCACAGAGGGTTTGAACTTTGGTGGGTTTCAAGAGCATGGTAATAATAATGGTTATCCCTTGTCTTTATTACGTGAGATGCAAGGAACACTTGGCAATTTAGATGATAATGCAATGGTGAAGATTCCTAATATGAATATGGCTCGTGGAGATGAGCAAGAGTTGGAGACAGTTCGATCTATTGGGTTTCCATTCAATTTGCCTTTGAATATTGGGGAAGCATGGAAGTCAAATCTACTTTGGGATACTTCTTCTCCTTGTCCTTGTGATGTGCCCTCAAATTACTCCACAACCAAGTGCTATACTTAG 1236 0.4175 MDERNDTEKLDEVVLPGFRFHPTDEELVGFYLRRKTQQRPLSIELIKQLDIYKYDPWDLPKLACTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSECSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSSSPKKYIDKTIPANDSWAICRIFKKTNSTARRALSHSWVSPLPETYTSDLLTKDENSPQFCSEPLTKKTGLTSQFHTNHSDIQHLNSSNSPLCGLDIGSYRPIVNPLLYKPFDQLPISNGESNTSLMFSSAHETSTATAKSSVDVSSMLLNMSSSMLGDFGKATEGLNFGGFQEHGNNNGYPLSLLREMQGTLGNLDDNAMVKIPNMNMARGDEQELETVRSIGFPFNLPLNIGEAWKSNLLWDTSSPCPCDVPSNYSTTKCYT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01276 411 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Bach4g01276 411 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Bach4g01276 411 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 265 - -
Bach4g01276 411 FunFam NAC domain-containing protein 35 23 175 - -
Bach4g01276 411 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Bach4g01276 411 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01276 Bach-Chr4 8939581 8941063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01276 1 307 NAC Transcription Factor Family AT1G26870 56.402 2.70e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach4g01276 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01276 - - vra:106768003 559.296