Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01263 ATGGCTGATCCTCAAAGGACGGGTATCGGCGAGAGGGATATCGAGCAGGCCATTACATATCTTAAAAAGGGCGCATATCTGCTAAAGTATGGACGCAGAGGGAAGCCAAAGTTCTGCCCATTTAGGCTTTCCAATGATGAGTCTCTACTTATATGGTACTCTGGAAAGGAGGAGAAACAGCTTAAGCTCGGTACTGTCTCGAAGATTATTCCTGGACAGCGAACTGCAACATTTCAGCGTTATCCTCGGCCTGAAAAGGAATATCAATCGTTTTCTCTTATATATAATGATAGGTCCTTGGATTTGATATGTAAGGACAAGGATGAAGCAGAAATTTGGTTTGCTGGTCTTAAGGCATTAGTTACTCAGGGTAACACTCGTAAGTGGAGACATGACGCAAGATCTGACATATTTTCTGATAGTTCGCAATCTTGCTCTCGAAGAACTACTCCTTCAATTACACCATATGATCCAGGAGATGCTGAAGGAGTTCCTTTTGACACTTCTTCAGAAAACAGATTGGGAAGAGCTTTTTCTGAAATAGTTTCATTCACTGCAACTGGCAAGCCTTCCTGTGAAGCCGAATCAATTGCAAATTCATCTTCATCCTTTGGGTCTGTGGAGAATTCAAATAATCAGAACTCAACAGCTGAGGCATTTCGAGTTAGTCTATCAAGTGCTGTAAGTTCATCCAGCCAGAGTTCTTACCATGAAGATTTTGAAGCCTTAGGTGATATTTTCATTTGGGGAGAAGGTATTGGTGAAGGAATTCTCGGTGGTGGTGTGCATGGAGTTGGAATCTTATCTAGCTCTGTTATGGATGCATTTCTCCCCAAGGCATTGGAATCAAAAGTAGTTCTAGATGTTCATAGTATTGCCTGTGGTTACAAACATGCTGTTGTAGTTACCAAGCAAGGAGAGATATTTAGTTGGGGAGAGGAGTCTGGGGGTAGGCTTGGGCATGGTGTAGAAGCAGATGTTTCCCATCCTAAGCTCATTGATGCTCTTAGTGGCATGAATATTGAGTTAGTAGCATGTGGAGAATATCATACTTGTGCTGTTACATTTTCTGGCGATCTTTATACATGGGGTGATGGTACTCACAATTCTGGTTTACTTGGGCATGGAACTGAAGCCAGTCGTTGGATTCCTAAGAAGGTAAGCGGTAACATGGAGGGTGTACATGTATCATATGTATCCTGTGGACCTTGGCACACTGCTATTGTGACATCATCTGGTCAGTTATTTACATTTGGGGATGGATCTTTTGGTGCATTAGGCCATGGAGATCACAGTAGCACAAATATTCCTCGTGAAGTAGAAACTTTGAAAGGGTTGAAAACAACGAAGGTTTCCTGTGGTGTTTGGCATACTGCTGCAGTTGTTGAGGTGATAAATGAATCTATGGAATCTTCTGGAGGCTCTCCTATTGGGAAACTGTTCACCTGGGGGGATGGAGATAAAGGCCGTCTAGGACATGGTGATAAGGAACCTAGACTAGTTCCTGAATGCGTAACTGCTTTGGATAATGAAAATATTTGTCGAGTGGCTTGTGGCCACAATCTTACAATTGCTTTGACAACCTCAGGACATGTATATACAATGGGCAGTACTGCTTATGGACAACTTGGCAATCCTGCAGCTGATGGAAATGTCCCCACACGTGTTAAAGGTAAAATTGCTGACTGTTTTATAGAAGATATTGCTTGTGGTTCTTACCATGTTGCCATCCTGACTGCCAAGACAGAGGTTTACACCTGGGGGAAGGGTTCAAATGGCCAGTTAGGTCATGGTGATATTGATCACAGAAGTACACCCACACTAGTTGAAACACTAAAAGATAAGCAAGTAAAGAGTGTTGTTTGTGGATCAAACTTTACTGCTGTTGTATGCCTTCATAAATGGGTTTCTGGGGCTGACCATTCTGTGTGCTATGGTTGTCATAATCCATTTGGATTCAGAAGAAAGCGCCATAACTGTTACAACTGTGGACTAGTCTTTTGCAGAGCATGCAGCAGTAAAAAATCTAGTAAAGCTTCCCTTGCTCCAAGTGCCAACAAGCCATACCGTGTTTGTGATGATTGTTACTCTAAACTTAAGAAAGCAGCAGAATCCACTTCCTTGGGGCAAACTCCCACCTCAAAAAGTGGAAGTACAAATGACTTGAAGGCTAGCAAATTACAGGGAACACTATCAAGGCTTTCATCTTTTGGTTCTATCTTTCAAGCAGAAAGCAGACAGGTAAAGCCTCCAGAATCACATGACAGCCACATTTTTCCGCCTTTGAATGGAAAATTACAGTTGGGCAGTTTCACTCCTTCAAAAGCATCAAATTCTCCGGTTGAAGCATCATCAAGGAGGCCCCTTTCAATTTCTGCTTCTTCTACTAGATTAGCTTCTCAAGCAACATCTCCAGTTTCATCGAAGTCTAGTCCATGGCAGTCTTACGAAGATATACATGATGAATCTAAGCAAAGAAATGAGATTCTAAAACAAGAGGTTACAAGTTTAAGGGTACAGGTTGAGGATCTTACTCTTAAATCCAAAAGACTTGAGGCTGGGCTTGAAAGGACGTCAAAGCAATTGAAAGAAGTCAATGCAGTAGCTGCAGATGAAGCTGAAAAATGTAGATCTGCCAAAGAGGTGATAAAGTCATTGACTGCTCAGTTGAAGGAGATTGTGCAAAAGCTGCCAGACGGACATAATCCCAACTCGAGTGCTGAATTTGATATTGGAACCAGGATTCAAAACCAGTCCTTGGATGAGAATCATATAACAAACATAGTCACCCCTGAAGCTGGGATAGACAGCAATGATGCTAATCAAATATTGCCTAATGGTATCAAAACACCTAGTGGAAAATCAGAGTGCGTGGTTCAAGATGAACCTGGTGTATACATAAGTTTGGCTTCCTTGCCAGGTGGTGCTAACGAACTTAAACGTGTTCGCTTCAGTCGGAGACATTTCACAGAAGAAGAAGCTGAGAAGTGGTGGGCTGAAAATGGAACCAAAGTATTGGAGCGGTACAATGTAGTTGCTTCGTAG 3045 0.423 MADPQRTGIGERDIEQAITYLKKGAYLLKYGRRGKPKFCPFRLSNDESLLIWYSGKEEKQLKLGTVSKIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEIWFAGLKALVTQGNTRKWRHDARSDIFSDSSQSCSRRTTPSITPYDPGDAEGVPFDTSSENRLGRAFSEIVSFTATGKPSCEAESIANSSSSFGSVENSNNQNSTAEAFRVSLSSAVSSSSQSSYHEDFEALGDIFIWGEGIGEGILGGGVHGVGILSSSVMDAFLPKALESKVVLDVHSIACGYKHAVVVTKQGEIFSWGEESGGRLGHGVEADVSHPKLIDALSGMNIELVACGEYHTCAVTFSGDLYTWGDGTHNSGLLGHGTEASRWIPKKVSGNMEGVHVSYVSCGPWHTAIVTSSGQLFTFGDGSFGALGHGDHSSTNIPREVETLKGLKTTKVSCGVWHTAAVVEVINESMESSGGSPIGKLFTWGDGDKGRLGHGDKEPRLVPECVTALDNENICRVACGHNLTIALTTSGHVYTMGSTAYGQLGNPAADGNVPTRVKGKIADCFIEDIACGSYHVAILTAKTEVYTWGKGSNGQLGHGDIDHRSTPTLVETLKDKQVKSVVCGSNFTAVVCLHKWVSGADHSVCYGCHNPFGFRRKRHNCYNCGLVFCRACSSKKSSKASLAPSANKPYRVCDDCYSKLKKAAESTSLGQTPTSKSGSTNDLKASKLQGTLSRLSSFGSIFQAESRQVKPPESHDSHIFPPLNGKLQLGSFTPSKASNSPVEASSRRPLSISASSTRLASQATSPVSSKSSPWQSYEDIHDESKQRNEILKQEVTSLRVQVEDLTLKSKRLEAGLERTSKQLKEVNAVAADEAEKCRSAKEVIKSLTAQLKEIVQKLPDGHNPNSSAEFDIGTRIQNQSLDENHITNIVTPEAGIDSNDANQILPNGIKTPSGKSECVVQDEPGVYISLASLPGGANELKRVRFSRRHFTEEEAEKWWAENGTKVLERYNVVAS 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01263 1014 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 292 302 IPR000408 -
Bach4g01263 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 707 IPR013083 -
Bach4g01263 1014 Pfam Pleckstrin homology domain 15 121 IPR001849 -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 306 357 IPR000408 -
Bach4g01263 1014 MobiDBLite consensus disorder prediction 140 163 - -
Bach4g01263 1014 CDD PH_PLC_plant-like 12 122 - -
Bach4g01263 1014 Gene3D - 13 129 IPR011993 -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 478 529 IPR000408 -
Bach4g01263 1014 CDD FYVE_like_SF 644 696 - -
Bach4g01263 1014 Pfam FYVE zinc finger 634 700 IPR000306 GO:0046872
Bach4g01263 1014 ProSiteProfiles BRX domain profile. 955 1010 IPR013591 -
Bach4g01263 1014 Pfam Transcription factor regulating root and shoot growth via Pin3 955 1009 IPR013591 -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 413 464 IPR000408 -
Bach4g01263 1014 SMART fyve_4 632 701 IPR000306 GO:0046872
Bach4g01263 1014 SUPERFAMILY RCC1/BLIP-II 244 635 IPR009091 -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 530 581 IPR000408 -
Bach4g01263 1014 MobiDBLite consensus disorder prediction 743 820 - -
Bach4g01263 1014 Coils Coil 820 896 - -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 358 412 IPR000408 -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 244 305 IPR000408 -
Bach4g01263 1014 MobiDBLite consensus disorder prediction 767 814 - -
Bach4g01263 1014 Gene3D - 471 646 IPR009091 -
Bach4g01263 1014 SUPERFAMILY PH domain-like 13 121 - -
Bach4g01263 1014 Gene3D - 196 469 IPR009091 -
Bach4g01263 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 582 633 IPR000408 -
Bach4g01263 1014 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 638 700 IPR017455 -
Bach4g01263 1014 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 57 891 - -
Bach4g01263 1014 PRINTS Chromosome condensation regulator RCC1 signature 577 598 IPR000408 -
Bach4g01263 1014 PRINTS Chromosome condensation regulator RCC1 signature 399 415 IPR000408 -
Bach4g01263 1014 PRINTS Chromosome condensation regulator RCC1 signature 308 324 IPR000408 -
Bach4g01263 1014 PRINTS Chromosome condensation regulator RCC1 signature 358 374 IPR000408 -
Bach4g01263 1014 PRINTS Chromosome condensation regulator RCC1 signature 415 429 IPR000408 -
Bach4g01263 1014 PRINTS Chromosome condensation regulator RCC1 signature 519 537 IPR000408 -
Bach4g01263 1014 Pfam Transcription factor BRX N-terminal domain 871 899 IPR027988 -
Bach4g01263 1014 FunFam PH, RCC1 and FYVE domains-containing protein 1 215 466 - -
Bach4g01263 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 529 577 IPR000408 -
Bach4g01263 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 583 630 IPR000408 -
Bach4g01263 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 412 461 IPR000408 -
Bach4g01263 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 478 526 IPR000408 -
Bach4g01263 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 357 408 IPR000408 -
Bach4g01263 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 306 354 IPR000408 -
Bach4g01263 1014 SUPERFAMILY FYVE/PHD zinc finger 634 707 IPR011011 -
Bach4g01263 1014 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 451 461 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01263 Bach-Chr4 8847325 8854135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01263 953 1011 Major Intrinsic Protein MIP AT1G31880 54.237 8.67e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01263 - - qsa:O6P43_033034 1433.31