Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01257 ATGTCGTCCACCAGAAGATCCCGTTCGAGACAATCCGGTAATGTTTCCAGCACTGAGATCACTGATGCTCAGATCATCGATCTCGTCTCCAAGTTGCAACAGCTTATCCCTGAGCTTCGCGCTAGGCGCTCCGACAGGGTTTCGGCAGCGAGGGTGTTGCAGGAGACTTGCAACTACATCAAGAACTTGCATAGGGAAGTTGATGATCTGAGTGACCGATTATCTCAACTTTTGGCCAACACAGACTCCAACAGCGCTCAAGCAGACATTATTAGGAGCTTACTTATGTAA 291 0.488 MSSTRRSRSRQSGNVSSTEITDAQIIDLVSKLQQLIPELRARRSDRVSAARVLQETCNYIKNLHREVDDLSDRLSQLLANTDSNSAQADIIRSLLM 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01257 96 CDD bHLH_AtPRE_like 15 80 - -
Bach4g01257 96 Pfam Helix-loop-helix DNA-binding domain 27 63 IPR011598 GO:0046983
Bach4g01257 96 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 63 IPR011598 GO:0046983
Bach4g01257 96 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 27 84 IPR036638 GO:0046983
Bach4g01257 96 FunFam Transcription factor ILI6 8 92 - -
Bach4g01257 96 Gene3D - 23 92 IPR036638 GO:0046983
Bach4g01257 96 PANTHER TRANSCRIPTION FACTOR PRE 3 96 IPR044293 GO:0006355|GO:0040008|GO:0046983
Bach4g01257 96 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01257 Bach-Chr4 8776951 8777541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01257 3 96 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 65.263 1.33e-32 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g01257 HLH 0.0002 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01257 - - gmx:100804830 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01257 4 8776951 8777541 Bach4g01257 4 8776951 8777541 ECH
Bach4g01257 4 8776951 8777541 Bach2g02034 2 27810006 27810831 ECH