Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01254 GAGAAAACGAAAGCTCTTCCCAAAGCTGATAAGGTATATAAGCCTTCCTTCAGAACTATTTGTCCATCATCTTCCATTCCAAGAAACACTAATTTTACTCTTAATTTAGCAGAGGAGGTTATGTATGCAGTAGACCTTAGTCTTTGCCAATCCTTCTTCAACAGAACTTTCTTCAATCTCTGAGCATCAGTGAATCTTCTCTCGTCTTATTAAGCATGAGAATCAGAACATCATAGAACTCCTGAAAGTTTCAAACAGACCAACAGTACAAGCAATGAAATATGGCTTTCTTCCCAGCAAATTTCATGCTACAAACCCCACACCAAGAAGATCATCAACCTCCACCTTCTCTAAACTCAATTCTTCCTTCTTGTGCTCCTCAAGATTATCATGCGTCCTTTCTTGGCAAGAGATCTATGTCATTTTCAGGGATTGAACTAGGTGAAGAAGCTATTGCTGAGGAAGATTTGTCAGATGATGGGTCACAGGCAGGGGAGAAGAAGAGGAGGCTTAACATGGAACAGGTGAAGACCCTTGAGAAGAGCTTTGAATTGGGAAATAAGCTTGAACCAGAGAGGAAAATGCAGCTAGCAAGAGCTCTTGGTCTGCAGCCTAGACAGATTGCTATATGGTTCCAGAACAGAAGGGCTAGGTGGAAGACCAAGCAGTTGGAGAAAGACTATGATCTTCTTAAACGACAGTATGACGCTATCAAGGCAGATAATGATACGCTTCGAGCTCAGAACCAAAAACTTCAAGCAGAGATATTGGCATCGAAAAGCAGAGAACCAACTGAATCTATCAACCTTAATAAAGAAACAGAGGGATCCTGCAGTAATAGAAGTGAGAACAGTTCGGATATTAAGTTGGATATCTCAAGGGCACCAGCTATTGATAGCCCTCTATCCACTCATCAAACCAGCAGAAACCTCTTCCCAACTTCTGCTAGGCCTACAGGAGTTGCACAGCTTTTCCAAACCTCTTCAAGGCCAGACCTCCAATGCCAAAAGCTTGATCAGATGGTCAAAGAAGAAAGCTTAACCAACATGTTTTGTGGTATTGATGATCAAACTGGGTTCTGGCCATGGTTGGAGCAGCAACATTTCAATTAAAGCAAAGGGAGAGAGAGAGTTTCAAATTGGATTGTAGTTTCTTCCCGGTGAAAATCAATCAAAAGGGTGTCCATTAAATACCATACTTTTTCATGTGTTGTTGAATTTTAAAG 1225 0.4122 MAFFPANFMLQTPHQEDHQPPPSLNSILPSCAPQDYHASFLGKRSMSFSGIELGEEAIAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYDAIKADNDTLRAQNQKLQAEILASKSREPTESINLNKETEGSCSNRSENSSDIKLDISRAPAIDSPLSTHQTSRNLFPTSARPTGVAQLFQTSSRPDLQCQKLDQMVKEESLTNMFCGIDDQTGFWPWLEQQHFN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01254 276 MobiDBLite consensus disorder prediction 163 192 - -
Bach4g01254 276 FunFam Homeobox-leucine zipper protein ATHB-13 65 132 - -
Bach4g01254 276 ProSitePatterns 'Homeobox' domain signature. 103 126 IPR017970 GO:0000981|GO:0006355
Bach4g01254 276 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 208 IPR045224 GO:0003700
Bach4g01254 276 ProSiteProfiles 'Homeobox' domain profile. 68 128 IPR001356 GO:0003677
Bach4g01254 276 Pfam Homeodomain 73 126 IPR001356 GO:0003677
Bach4g01254 276 PRINTS Lambda-repressor HTH signature 99 108 IPR000047 GO:0003677
Bach4g01254 276 PRINTS Lambda-repressor HTH signature 108 124 IPR000047 GO:0003677
Bach4g01254 276 Coils Coil 120 168 - -
Bach4g01254 276 Pfam Homeobox associated leucine zipper 128 163 IPR003106 GO:0006355|GO:0043565
Bach4g01254 276 CDD homeodomain 73 129 IPR001356 GO:0003677
Bach4g01254 276 SMART HOX_1 71 132 IPR001356 GO:0003677
Bach4g01254 276 Gene3D - 65 134 - -
Bach4g01254 276 SUPERFAMILY Homeodomain-like 67 130 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01254 Bach-Chr4 8752794 8754774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01254 1 276 Homeobox Transcription Factor Family AT1G69780 63.729 1.32e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach4g01254 Homeodomain 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01254 K09338 - gmx:100801479 490.73