Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01243 ATGGTTGTCGGTGCTTTGCCGCCTAGGGTTTTTGTGGGTCACTCAATATACAAAGGGAAGGCTGCTCTTACAGCGACTCCTATACCTCCAGAATTTGCGCCATTGGACTCAGGGGCATTCAAAGTATCTAGGGAAGGTTCTGTGTTGCTTCAGTTTGCTCCTGCAGTTGGTATGCGCCAGTACGACTGGAATAGAAAGCAGGTATTCTCTCTATCAGTCAGTGAAATGGGAAGTGTTATTAGCCTTGGTGCAAGGGATTCTTGTGAATTCTTCCATGATCCTTTTAAAGGGAAAAGTGATGAAGGTAAAGTTCGAAAAGTTTTGAAGGTGGAGCCACTTCCAGATGGTTCTGGTCACTTCTTTAACCTCAGTGTTCAAAACAAGCTTGTGAACGTGGACGAAAGCATCTATATCCCAGTTACAAAATCAGAGCTAGCAGTTTTTCACTCAATTTTCAACTTTATCATTCCCTACCTTCTAGGTTGGCATGCCTTTGCAAATTCCATAAAGCCAGAAGATCTCGGCCAAATGAATAATGCTAACCCATATGGAGGAGGCTATGAATGGAGCAGATAGTGAGACTCTACTGTGTCTCGCAAGAGGTTTAATTAGGTGCGAGCTGCTCAACTTTGAAGTGTGAATTAGCTTAGTGGATAGAACCCTTGGGAAATTTTGCCACCTTTTTCATTTGACATGAGCAATAGTATCTTTTCATCAAACACTTCTTGTTTCTTTGGATAAGCCTTAGAGTAGTGTTC 758 0.4248 MVVGALPPRVFVGHSIYKGKAALTATPIPPEFAPLDSGAFKVSREGSVLLQFAPAVGMRQYDWNRKQVFSLSVSEMGSVISLGARDSCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPVTKSELAVFHSIFNFIIPYLLGWHAFANSIKPEDLGQMNNANPYGGGYEWSR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01243 191 SUPERFAMILY ssDNA-binding transcriptional regulator domain 8 187 IPR009044 GO:0003677|GO:0006355
Bach4g01243 191 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 6 191 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bach4g01243 191 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 2 176 - -
Bach4g01243 191 Pfam Whirly transcription factor 16 150 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bach4g01243 191 Gene3D Transcriptional Coactivator Pc4; Chain A 2 173 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01243 Bach-Chr4 8656159 8658511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01243 6 191 Whirly Transcription Factor Family AT1G14410 75.936 7.94e-108 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bach4g01243 Whirly 4e-61 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01243 K26559 - pcin:129310571 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01243 4 8656159 8658511 Bach4g01243 4 8656159 8658511 ECH