Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01234 TTTGTAGTTACTCTCTCTATTGCTCCATCATCTCCATAATTTCCCTTTCATTTTCGTTGACATAATTTCTCTGTTTTGTGAAAGAGAAACGATTGATGGGTATTCATCTTTCGTTGCATTTGTTGATTCTCACCACAATTCGCATAAGATATTTCCCGATTTTCATCTGCAAGCTGAAAAAGCTGAGTCTTGCTGTTCCCTATACCAGTGTTGCAAGCGATGTACCTCTTTCACGTAACACCTTGTTTTCCCATATTGGTGTTTTTTTAAGAATAAGTATCAAATCTATGAGCTGTTGATGATACTTGCCGACATTGTCTAGCTGCACAGTTCGTGGGCTCTTCGTACCGTTTCCCTTTTATCTGTAGAATTTTTTTCCGAATTCTACGCTTAATCCATTGTTCGCACCTGTTTTTCAGTGTCTGTTCTGCTTGGTTTTTGTGGAGACTGTGAGTTCTCGAAGTTATTTGGAAGAAGCGATACGCGCCTCAACGTGCCACATGGGATTGGAAATAACTCGCACAACGAGGAGAAGCAAAGGTTCTGAACAGGAAGTAGAGAGCAGAGAGGATGGAATCACAGTTGGGTTTAATAGGCCAATCATTCAGTAGTCGATACTCGAACTATGTCCACGAGGCACTCGACGAATTGCCTGATAATTTTATCATCACCGACCCTTCTATTTCTGGTCATCCAATTGTGTTTGCAAGCCGTGGGTTCCTGAAAATGTCAGGGTATTATAAAGAAGAGGTGATTGGGAAGAATGCGAGAATATTTCAAGGACCCGGTACTTGTAGGAGATCGATAATGGAAGTTAGAGAAGCAATAGGGGCAGAGAGAACTATTCAGATAAATTTGTTGAATTATCGTAAAGACGGGACACCCTTTTGGATGCTATTTCATATGAGCCCAGTCTTTAGTCAGGATGATGGGCGGGTGATCCATTTCGTGGCAGTTCAGGTACCTACATCGAAAAAACGAAGGAGGTCTCGTTGTGGATATAGAAGAAATGGAGTTAGTTTGTCTGAGGATAGCTTGCAGGTGCAGGATTTTGTTTTTGGGTCCTGCAGGAAGGAAGTGTGCTCGGATTCTTTGTTGGAACTGGGTCATGTGTCCCTGGAACAAGTGTTGGAAAATGATATTAGAGAACCAGAGTCTCAAGAGCCATGCGAGGCAAGTGATGTTGAGAAGAGAAAATGTATGACTGCAATGGACAACATCTTTTCTTTGCTAACTCACTACAGCGAGTTAACTGGCAGATTGGTGTGCAGAAAGAGATGCAGCATCCCTGACGTGGGTCTTCCTAGCTCATCCTTGATTATTTCTCTTGGTAGCATCAAACAGAGCTTTGTATTAACTAATCCACACCTACCTGACATGCCTATTGTGTACGCCAGTGATGCCTTCTTGAAATTGACAGGTTATGCAAGGAATGAAGTGTTGGGGCGCAATTGTAGATTTTTAAGTGGAGTGAGTACTGATACTTCAACTTTATGTCTGATCAGGGAAAGCATTAAAACTGAACAACCATGTACAGTACGTATTTTGAATTACAGGAAGGATAAAAGCTCGTTTTGGAATCTTCTCCACATATCACCTATTCGTGATGCTTCTGGCAAGATAGCATACTTTGTGGGTGTTCAAATAGAAGAAGGCTGTAATGGTAAGACGCAGGAGAGACAGGGCTTGAGCCCCGAGAAGAGACTGCTAAGCGTGGTTGGTTCAGTCAAGATTGCTGTGAGGAGTTCATCAATGAGTACTGCTGGATCTTCAAGTCATAGCATAACTTGA 1791 0.4221 MESQLGLIGQSFSSRYSNYVHEALDELPDNFIITDPSISGHPIVFASRGFLKMSGYYKEEVIGKNARIFQGPGTCRRSIMEVREAIGAERTIQINLLNYRKDGTPFWMLFHMSPVFSQDDGRVIHFVAVQVPTSKKRRRSRCGYRRNGVSLSEDSLQVQDFVFGSCRKEVCSDSLLELGHVSLEQVLENDIREPESQEPCEASDVEKRKCMTAMDNIFSLLTHYSELTGRLVCRKRCSIPDVGLPSSSLIISLGSIKQSFVLTNPHLPDMPIVYASDAFLKLTGYARNEVLGRNCRFLSGVSTDTSTLCLIRESIKTEQPCTVRILNYRKDKSSFWNLLHISPIRDASGKIAYFVGVQIEEGCNGKTQERQGLSPEKRLLSVVGSVKIAVRSSSMSTAGSSSHSIT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01234 406 SMART pac_2 93 136 IPR001610 -
Bach4g01234 406 SMART pac_2 322 361 IPR001610 -
Bach4g01234 406 SUPERFAMILY PYP-like sensor domain (PAS domain) 262 358 IPR035965 -
Bach4g01234 406 Pfam PAS domain 38 131 IPR000014 -
Bach4g01234 406 Pfam PAS domain 259 358 IPR000014 -
Bach4g01234 406 SUPERFAMILY PYP-like sensor domain (PAS domain) 28 130 IPR035965 -
Bach4g01234 406 Gene3D PAS domain 259 404 - -
Bach4g01234 406 FunFam Protein TWIN LOV 1 isoform D 30 223 - -
Bach4g01234 406 PANTHER PROTEIN TWIN LOV 1 4 392 - -
Bach4g01234 406 CDD PAS 268 357 IPR000014 -
Bach4g01234 406 NCBIfam PAS domain S-box protein 272 357 IPR000014 -
Bach4g01234 406 NCBIfam PAS domain S-box protein 25 128 IPR000014 -
Bach4g01234 406 CDD PAS 27 130 IPR000014 -
Bach4g01234 406 ProSiteProfiles PAC domain profile. 90 145 IPR000700 -
Bach4g01234 406 ProSiteProfiles PAS repeat profile. 272 294 IPR000014 -
Bach4g01234 406 Gene3D PAS domain 17 152 - -
Bach4g01234 406 ProSiteProfiles PAS repeat profile. 16 65 IPR000014 -
Bach4g01234 406 SMART pas_2 247 320 IPR000014 -
Bach4g01234 406 SMART pas_2 18 87 IPR000014 -
Bach4g01234 406 FunFam protein TWIN LOV 1 259 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01234 Bach-Chr4 8592809 8596295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01234 249 391 AGC Kinase Gene Family AT5G58140 42.568 4.84e-36 138