Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01231 CTCTGACCACACCGTCTACTCTGTCTCATTCCAAACACAAGCAATAAACGAGTTTCTCTGCTCCTTTTCTCTCTAATTATTCACATCTGACAAGCTCTTAATTCCCTCTTTGCGGCACTGGCAGTGAGTGATGGGTATGAACTCTCCTCATTCCCAGAATTCCTGCATTACTGTAATCCTCATCACCTGTTTCTTTCGCCATTAATTTTAGATCAAATTCCTTATGGGCATGCATATGAGCTTTCAATTATAAATCTCTGAAAAAATCCCAGTTGCAAAAGATTTCCTGAAGCTATGGCTAGTGGCAAAGTTTATGGTACTTCAAGCATGACCGTTTTGCTCCAAAACGATAGGCTTCCTTGCTCCTCTGAAGTTCTTGAGTCTCTCTGGGTTCACCCCTCTGGCCCTTCTTTCCAAGGTTCAAAATCTCTGGTTGATTTCGAGAATGCTAGCAACAACCCAGACAGGGCTTTCTTCCAAAAGCTTGAAAAGGAAGAGAACGTAGATGAAGATTACGACGCGTGCTTTCATCAACCCGGTAAGAAGAGGCGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGGAATTTTGAGGTAGAAAACAAGCTTGAACCCGAAAGAAAAGTCCAACTAGCAAAAGAGCTTGGCTTGCAGCCTAGGCAAGTTGCAATATGGTTCCAAAACCGAAGAGCTCGGTTCAAGACCAAACAACTCGAGAAAGACTACGGCACATTGAAGGCTAGTTTTGATAAGCTCAAAGGCGATTATGACAATCTCTTCCACGAGAACGAGAAGTTAAAACAAGAGGTGAATTCCCTCAAGGAGTTGAGTGCCAGAGAGAAAGAGAAAGAGAAAGAGAATTCTAACTGTGACAAGCCTTCGTCCCCTGGTAAAGAGGCTCTGGATTTGATCTCAAATGCAGTTTCTGAAAAAGGGTCTAAAGTGGAAATGGTGATCTGCAAACAGGAAGATGCCAATTCAGCTGGAAGCGATGTGTTTGATTCGGATAGCCCACATTACACCGATGGCAACCATTCAACTTCATTCTTGGAGCCTGCACATTCCTCTCATGCTTCCGAACCAGACCAGTCTGATTTCTCCCAAGACGAAGAAGATAACCTAAGTGACAAGCTTTTCACTCAGCTCCCTTGCTTGCCAAAGGTTGAAGATTGCTGCTATGATCAGGATGACCCACCTCACAATTCTTGTCACTTTGGGTTCCCTGTTGAAGATCAAACCTTCTGTTTTTGGCCTTATTAAGTCACTGGCTAGCACTTCACAATGCTGTTAGATTAAATAGGCAGTTGTCAC 1311 0.4363 MASGKVYGTSSMTVLLQNDRLPCSSEVLESLWVHPSGPSFQGSKSLVDFENASNNPDRAFFQKLEKEENVDEDYDACFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASFDKLKGDYDNLFHENEKLKQEVNSLKELSAREKEKEKENSNCDKPSSPGKEALDLISNAVSEKGSKVEMVICKQEDANSAGSDVFDSDSPHYTDGNHSTSFLEPAHSSHASEPDQSDFSQDEEDNLSDKLFTQLPCLPKVEDCCYDQDDPPHNSCHFGFPVEDQTFCFWPY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01231 321 MobiDBLite consensus disorder prediction 229 274 - -
Bach4g01231 321 Pfam Homeodomain 83 136 IPR001356 GO:0003677
Bach4g01231 321 MobiDBLite consensus disorder prediction 230 264 - -
Bach4g01231 321 FunFam Homeobox-leucine zipper protein HAT5 76 140 - -
Bach4g01231 321 Gene3D - 76 144 - -
Bach4g01231 321 Pfam Homeobox associated leucine zipper 138 178 IPR003106 GO:0006355|GO:0043565
Bach4g01231 321 SUPERFAMILY Homeodomain-like 73 140 IPR009057 -
Bach4g01231 321 ProSiteProfiles 'Homeobox' domain profile. 78 138 IPR001356 GO:0003677
Bach4g01231 321 Coils Coil 151 188 - -
Bach4g01231 321 MobiDBLite consensus disorder prediction 180 194 - -
Bach4g01231 321 SMART HOX_1 80 142 IPR001356 GO:0003677
Bach4g01231 321 PRINTS Lambda-repressor HTH signature 109 118 IPR000047 GO:0003677
Bach4g01231 321 PRINTS Lambda-repressor HTH signature 118 134 IPR000047 GO:0003677
Bach4g01231 321 ProSitePatterns 'Homeobox' domain signature. 113 136 IPR017970 GO:0000981|GO:0006355
Bach4g01231 321 MobiDBLite consensus disorder prediction 180 202 - -
Bach4g01231 321 CDD homeodomain 81 139 IPR001356 GO:0003677
Bach4g01231 321 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 65 237 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01231 Bach-Chr4 8560578 8562321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01231 42 244 Homeobox Transcription Factor Family AT3G01470 44.660 5.65e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach4g01231 Homeodomain 3.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01231 - K09338 qsa:O6P43_025407 424.476