Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01230 CTCAGCATGAGCCGCAAGCGAGAGAAACCCTACTTTTACCGCCACGCCCCATCCTTTGCCGCCAAGAGGCGTCGCCCTTTGCCTCCGTTACCCACTGTCGATGAAGGCGGTGAGAAGCAGAAAACAAGGCCACCGCCACCGTCCGCCGTGGTGGTCATGGGTCTTCCTTTAGATTGCTCCGTCCTCGATCTCAAGTCCCGATTCGAGATCTATGGTGCCATCTCCCGCATCCGCATCGACCGTGATGGGGTTGGCTACATTACTTTTCGGACCAAGGAATCTGCAGATGGCGCCATTGCAGCTGGCCTTGACCATTCGTTTGGAATCACAGTAAACTCAAAAAAGGTCCAGGTATTGTGGGCAACTGATCCGCTGGCCATGTGGAGGGAAGGAATTGGTAATAATAAGGATAAAGGGTCTATGTCAAAGCTTGTGCGTGCTGAGAAACCTCTGAGTAGACATGGAAGAGGTAATAAACTTGCTTCAGCTGTAGCGAATCCCAAAACTAGCGAGGATAGTTCAGGAAGCTCAACACCGGACATGCCTTTCAGGGGCAGAGAAATTATTGCATATGATGATATCCTGTAACCTAGAAGCAGCATTCTCAAGGGCTTATCTTATTTGTAAACAAAATAGTAGAATTCTAGATTTAGATTTTGATTGATTTTCAAGTATTTCAGAGAAGAAGCTGCTCTGCAAACAAATGGGGGTTACTTGTGGGAGCTTCTGGTGTAACTTAGTTTCTGATTATAATGTTTGATATTTGTTACTTGAGGGAGCTTCTGGTGTA 790 0.4709 MSRKREKPYFYRHAPSFAAKRRRPLPPLPTVDEGGEKQKTRPPPPSAVVVMGLPLDCSVLDLKSRFEIYGAISRIRIDRDGVGYITFRTKESADGAIAAGLDHSFGITVNSKKVQVLWATDPLAMWREGIGNNKDKGSMSKLVRAEKPLSRHGRGNKLASAVANPKTSEDSSGSSTPDMPFRGREIIAYDDIL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01230 193 SMART rrm1_1 47 117 IPR000504 GO:0003723
Bach4g01230 193 MobiDBLite consensus disorder prediction 161 178 - -
Bach4g01230 193 CDD RRM_SF 48 116 - -
Bach4g01230 193 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 98 IPR000504 GO:0003723
Bach4g01230 193 Gene3D - 30 176 IPR012677 -
Bach4g01230 193 MobiDBLite consensus disorder prediction 1 45 - -
Bach4g01230 193 MobiDBLite consensus disorder prediction 148 181 - -
Bach4g01230 193 SUPERFAMILY RNA-binding domain, RBD 31 130 IPR035979 GO:0003676
Bach4g01230 193 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 121 IPR000504 GO:0003723
Bach4g01230 193 PANTHER GEO13361P1-RELATED 41 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01230 1 193 Homeobox Transcription Factor Family AT1G27050 51.707 1.76e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01230 - - ccaj:109806897 280.411