Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01188 TGTTTGTCTCCTCGGAAAATAGGAAAATTTTGAAGTCAGAGACTTCATTTTAATTCTGGTATTTTGACCATCTTAGGCTGCTGTTGGAGAATCACAGCGTTAAGAAACCTCTTCCATACATTAAGCCTTTTCATCTGTTTTATTTTTGTGTGTCTGTCTAGAGCTTGTTGACGACTCTACAGTTCGGGAACTTCACGATCACTTTATTTTGGGCCTCCTCCGAGGTGATCTGTCTCAAAGGCTGAGGATTTTGAATTTTATCGGAGTTGGAAGCATGATTTGGTGTTGAAGGAAGGTGAGGTTTCTTTCATTGTCTTGTTGGAGATGAAGAGGTCGAGAGATGATGTTTTTATGGGTTCTCAACTCAAACGGCCTATGATATCTTCTCGAGGAGAAGCCTCTGGGCAACCCCAGATGATGGGAGGAGGTGGTCAGAAACTAACTACAAATGATGCCTTAGCATATCTAAAAGCAGTAAAGGACATATTTCATGATAAGAGGGAAAAGTATGATGATTTCTTGGAGGTCATGAAGGATTTCAAGGCTCAAAGAATTGATACTGCGGGTGTCATAGCAAGAGTGAAGGATTTGTTTAAAGGGCATAGAGATCTAATTTTGGGATTCAACACCTTCTTGCCGAAGGGATACGAAATCACACTCCCACTGGAGGATGAACAACCTCCCCAAAAGAAGCCTGTTGAATTTGAAGAAGCTATAAATTTTGTGAACAAAATTAAGAATCGCTTTCAAGGTGATGACCATGTTTACAAGTCATTTTTAGACATATTGAACATGTACAGAAAGGAAAACAAGTCTATTCACGAGGTCTACCAAGAGGTTGCTGCACTTTTCCAAGACCACCCAGACCTTCTTGATGAATTTACTCATTTTCTTCCCGATGCTTCAGCAACAGCTTCTTTACATTTTGCTCAATCTGCTCGGAATTCTATGCTTCGTGATAGGAGTTCTGCAATGCCGGCAGGGCGGCAAATGCATGTTGACAAGAGAGAAAGGGCAATTGCTTCACATGGTGATCGTGACCTCAGTGTAGACCGTCCTGATACAGATCATGACAGACATTTGATGAGGGACAAGGAGCAGAGAAGGCAGAAGGAAAAGGATTGCAGAGAAGATAGAGACTATGAGAATGATGGTAGTCGGGACTTCAATATGCAGTGTTTTCCCCACAAGCGGAAAATTGGTCGTAGGCCTGAAGATTCTGGTACTGATCCATTGCACCAAGGAGGTGATGGTGATGAAAATTTTGGGATGCCCCCCATGTCATCTGCTGGCGATGATAAAAGTTCTGTGAAAATTTCGTCAGGTATGTACAGTCAAGAGTTTGCTTTCTGTGAAAAAGTCAAGGAGAAATTACAAAATCCTGAGGATTATCAGGAATTTTTGAAGTGTCTACATATCTATAGCAGGGAGATCATTACCCGACAAGAATTGCAGTCATTGGTGGGTGATTTACTGGGAAAATATCCAGACCTTATGGATGGGTTTAATGAATTTTTGGCACGATGTGAGAAGAATGATGGATTCCTAGCTGGTGTTATGAACAATAAAAAGTCCATATGGAGTGAAGGACAAAAACCAGTTAAAGTGGAGGAGCGGGATAGAGATCGAGAAGGTGATAGGGATAGGGATGACGGGGTTAAGGAAAGGGATCATGAAACACGAGAAAGGGACAAATCTACTGCCTTTTCTAACAAGGATGTTTCTGGTTCTAAGATGTCTCTATTTTCTAGTAAGGATAAGTATTTGGCAAAACCTATAAGTGAGCTGGACCTTTCTAACTGTGAACGGTGCACTCCCAGTTACCGTCTCCTACCCAAAAATTACCCAATACCTACAGCTAGCCAGAGAACAGAGCTTGGTGCTGAACTCTTGAATGATCATTGGGTGTCTGTCACTTCAGGAAGTGAGGATTATTCTTTTAAACACATGCGCAAAAATCAATATGAAGAGAGCTTGTTTAGATGTGAAGATGACAGGTTTGAACTGGATATGTTGTTAGAGTCTGTGAATGTGACAACCAAGCGAGTAGAAGAGCTCTTAGATAAGATCAATAATAATACAATTAAAGCAGACAGTCCAATTCGTATTGAGGAGCACTTAACAGCTCTAAATCTAAGGTGCATTGAACGATTATATGGTGACCATGGACTTGATGTGATGGATGTGTTAAGAAAGAATGCACCTCTTGCTTTGCCAGTCATATTAACTCGCTTGAAGCAGAAACAGGAAGAGTGGGCTAGGTGTCGTGCCGATTTTAATAAAGTTTGGGCTGAAATATATGCTAAGAACTATCACAAGTCTCTTGATCATCGAAGCTTCTACTTTAAGCAACAGGATACAAAAAGCTTGAGCACAAAAGCCTTACTGGCAGAAATCAAGGAAATCAGTGAGAAGAAACGCAAAGAAGATGATGTTCTTCTTGCGATTGCTGCTGGAAATAGACGGCCTATTCTTCCAAATCTGGAATTTGATTATCCCGATCCAGATATTCACGAAAATCTGTATCAACTCATAAAGTATTCCTGTGGTGAAGTTTGCACAACTGAACAGTTGGATAAAGTTATGAAGATTTGGACAACCTTTTTAGAAGCCATGCTGGGTGTTCCTTCTCGACCCCAAGGACCTGAAGATACAGAAGATGTTGTCAAGGCTAATAATAATTCTGTCAAAAGTGGCACTACAAGTGTTGTTGAGAGTGATGCTAGTCCTGGTCTTGGTGCTGCTAAACATTTAAATACTTCTAGAAATGGGGATGAGAGTATTCCACTAGAACAATTGAATTCTTGCAGGGCATGGCAAACAAATGGGGATGGTGGGATTAAAGAAGATAACTGTCTTGATGCAGACCGAACTTTGCGCAAATCTGAAACTTTGGGCAACAGTACGCAGCATGGTAAAATGCATAGTAGTGTAGCCATGCCTGATGAAGTATCAGGGGTCAGCAAGCAAGATCATTCCTATGAACGGTTAGCAAATGCTAATCCCCCAGTGGCCTCTGGAATAGATCAAAGTAATGCAAGAACAAATATAGATAATGCATCAGGGCTCAATACTACTCCATCTAGACCTGGTAATGTTGCTGCCGAAGGAGGAATTGATCTACCTTCATCAGAGGGTGGTGATTCTACAAAACCAGTTACATCCACAACTGGGGCAACATATGAAGGCACCAAAGGCCAGAAATACCAAGAAGAATCTGTTGGACACTTCAAAAGTGAAAGAGAAGAGGGTGAATTATCTCCAAATGGAGATTTTGAGGAGGATAATTTTGCAGTTTATGGAAATGGTAGTTTGGAAGCAGCCAATAAGGGGAAGGATAGTGGTGTGAGTAGGCAATATCCCAATAGACATGGGGAAGAGGTTTGCTGTGGTGAGGCAGGAGGTGAAAATGATGCTGATGCTGATGATGAGGGTGAAGAAAGTCATCACAGGTCTTCGGAGGACAGTGAAAATGCTTCTGAAAATGGTGATGTTTCAGGAAGCGAGTCTGCTGATGGTGAGGAGTGTTCTCGAGAAGAACATGATAACAAGGGTGAGAGTGAAGGCGAAGCTGAGGGAATGGCTGATGCCAATGATGTTGAAGGAGATGGAACCTCATTACCCTTTTCAGAGCGCTTTCTACGAACCGTAAAGCCTCTTGCAAAGCATGTTCCACCGATGTTGCATGAGAAAGAAAGGGATTCTCGAATTTTTTATGGGAATGATTCCTTTTATGTTCTTTTCAGGCTTCATCAAACATTGTATGAGAGGATACAATCAGCAAAGATTAATTCATCATCTGCTGAAAGAAAGTGGAGGGTTCCAAATGACACAAGCTCTACAGATCAATTTGCCAGGTTCATGGATGCCCTTTACAATTTACTAGATGGTTCTTCTGACAATACAAAATTTGAGGATGATTGCCGAGCTATTATTGGAACTCAATCATATGTCTTATTCACATTGGACAAGCTGATTTATAAACTAGTTAAACAGCTTCAAGCAGTTGCCACTGATGAAATGGATAACAAGCTCCTTCAACTTTATGCATATGAGAAATCAAGAAAACCTGGAAGATTTGTTGATATAGTTTATCATGAGAATGCTCGTGTTCTTCTTCATGATGAGAACATATACCGTATTGAATGTTCGTCTACACCAACTCGGTTGTCTATCCAACTGATGGACTATGGACATGATAAGCCTGAAGTGACTGCTGTATCAATGGACCCAAATTTTTCAGCTTATCTGCACAACGATTTCCTCTCTGTTGTTCCTGACAAAAAGGAGAAGTCAGGGATTTTCTTGAAAAGGAACAAACATAGATACGCATGTGGTGATGAATTTTCAAGCCAGGCTATGGAAGGCCTACAAGTTATCAATGGTCTGGAGTGTAAGATAGCTTGCAATTCATCCAAGGTTTCATACGTTTTAGATACTGAAGACTTTTTATTTCGGAAGAGACAGAAAAGGAGAACTTCACATCAGAACAGCTCAAGCCATGAACAGGCAAAGCCTTCAAACATGATTTCAAGCAGAGTGCAACGGTTTCACAAATTGTTTTCCATGACATAA 4575 0.4098 MKRSRDDVFMGSQLKRPMISSRGEASGQPQMMGGGGQKLTTNDALAYLKAVKDIFHDKREKYDDFLEVMKDFKAQRIDTAGVIARVKDLFKGHRDLILGFNTFLPKGYEITLPLEDEQPPQKKPVEFEEAINFVNKIKNRFQGDDHVYKSFLDILNMYRKENKSIHEVYQEVAALFQDHPDLLDEFTHFLPDASATASLHFAQSARNSMLRDRSSAMPAGRQMHVDKRERAIASHGDRDLSVDRPDTDHDRHLMRDKEQRRQKEKDCREDRDYENDGSRDFNMQCFPHKRKIGRRPEDSGTDPLHQGGDGDENFGMPPMSSAGDDKSSVKISSGMYSQEFAFCEKVKEKLQNPEDYQEFLKCLHIYSREIITRQELQSLVGDLLGKYPDLMDGFNEFLARCEKNDGFLAGVMNNKKSIWSEGQKPVKVEERDRDREGDRDRDDGVKERDHETRERDKSTAFSNKDVSGSKMSLFSSKDKYLAKPISELDLSNCERCTPSYRLLPKNYPIPTASQRTELGAELLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINNNTIKADSPIRIEEHLTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPILPNLEFDYPDPDIHENLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEAMLGVPSRPQGPEDTEDVVKANNNSVKSGTTSVVESDASPGLGAAKHLNTSRNGDESIPLEQLNSCRAWQTNGDGGIKEDNCLDADRTLRKSETLGNSTQHGKMHSSVAMPDEVSGVSKQDHSYERLANANPPVASGIDQSNARTNIDNASGLNTTPSRPGNVAAEGGIDLPSSEGGDSTKPVTSTTGATYEGTKGQKYQEESVGHFKSEREEGELSPNGDFEEDNFAVYGNGSLEAANKGKDSGVSRQYPNRHGEEVCCGEAGGENDADADDEGEESHHRSSEDSENASENGDVSGSESADGEECSREEHDNKGESEGEAEGMADANDVEGDGTSLPFSERFLRTVKPLAKHVPPMLHEKERDSRIFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWRVPNDTSSTDQFARFMDALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVATDEMDNKLLQLYAYEKSRKPGRFVDIVYHENARVLLHDENIYRIECSSTPTRLSIQLMDYGHDKPEVTAVSMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKHRYACGDEFSSQAMEGLQVINGLECKIACNSSKVSYVLDTEDFLFRKRQKRRTSHQNSSSHEQAKPSNMISSRVQRFHKLFSMT 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01188 1416 Gene3D Paired amphipathic helix 331 403 IPR036600 GO:0006355
Bach4g01188 1416 Gene3D Paired amphipathic helix 121 194 IPR036600 GO:0006355
Bach4g01188 1416 MobiDBLite consensus disorder prediction 1036 1050 - -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 784 821 - -
Bach4g01188 1416 SUPERFAMILY PAH2 domain 119 192 IPR036600 GO:0006355
Bach4g01188 1416 FunFam Paired amphipathic helix SIN3-like protein 122 193 - -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 422 461 - -
Bach4g01188 1416 SUPERFAMILY PAH2 domain 37 106 IPR036600 GO:0006355
Bach4g01188 1416 MobiDBLite consensus disorder prediction 1063 1083 - -
Bach4g01188 1416 FunFam Paired amphipathic helix protein Sin3 43 105 - -
Bach4g01188 1416 SUPERFAMILY PAH2 domain 336 401 IPR036600 GO:0006355
Bach4g01188 1416 PANTHER SIN3B-RELATED 37 1274 IPR039774 GO:0003714
Bach4g01188 1416 MobiDBLite consensus disorder prediction 896 923 - -
Bach4g01188 1416 ProSiteProfiles PAH domain profile. 37 107 IPR003822 GO:0006355
Bach4g01188 1416 ProSiteProfiles PAH domain profile. 329 401 IPR003822 GO:0006355
Bach4g01188 1416 Gene3D Paired amphipathic helix 43 105 IPR036600 GO:0006355
Bach4g01188 1416 MobiDBLite consensus disorder prediction 231 329 - -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 1380 1401 - -
Bach4g01188 1416 Pfam Paired amphipathic helix repeat 146 190 IPR003822 GO:0006355
Bach4g01188 1416 Pfam Paired amphipathic helix repeat 354 398 IPR003822 GO:0006355
Bach4g01188 1416 Pfam Paired amphipathic helix repeat 60 104 IPR003822 GO:0006355
Bach4g01188 1416 MobiDBLite consensus disorder prediction 231 305 - -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 784 799 - -
Bach4g01188 1416 Pfam C-terminal domain of Sin3a protein 1130 1376 IPR031693 -
Bach4g01188 1416 ProSiteProfiles PAH domain profile. 123 193 IPR003822 GO:0006355
Bach4g01188 1416 MobiDBLite consensus disorder prediction 855 1099 - -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 939 959 - -
Bach4g01188 1416 SMART hdac_interact2seq4b 492 592 IPR013194 -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 421 469 - -
Bach4g01188 1416 MobiDBLite consensus disorder prediction 961 978 - -
Bach4g01188 1416 FunFam Paired amphipathic helix protein SIN3 330 403 - -
Bach4g01188 1416 Pfam Sin3 family co-repressor 494 586 IPR013194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01188 Bach-Chr4 8206416 8215893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01188 28 142 WRKY Transcription Factor Family AT4G12020 52.137 4.24e-25 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach4g01188 Sin3a_C 1e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01188 K11644 - mnt:21394293 2222.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01188 4 8206416 8215893 Bach4g01188 4 8206416 8215893 ECH