Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01176 ATGGAAAAGGATGTCTGCTGTGATCTTTCTTCTTCTTCATGGGATGGAGAAAATGGTCATTCTGTGGAGAAGAGGCTCAAGTTGTTTGGCTTTGAGCTGAACCCTTGTGTCAAAGAATCTGTAGAAGGAGACGAGAGTGTCAATTCCTCAAACACAGTTTCATCTGGTGGAGATCAGAAGACAACACAGGAACAGGAGAAGAGCTCAACCAGATCAGACCCAGATGAGAGGAAGTTCGAGTGCCAGTATTGTTTCAAGGAATTTGCAAATTCACAAGCACTAGGTGGGCACCAGAATGCCCACAAGAAAGAAAGAATGAAGAAGAAAAGGTTGCAGCTTCAAGCCAGAAAAGCCAGCATAAACTATTACCTACAACCTTTCCAGAGCAACGTTGGCTTTGCTCACCATGCTTCTACTCCTTGGTTCTACGATCCTTCTTCTTATGACAACTCTGAGTTCACTCTCTATGAAGAATCTCAGATTAGCTTCAATTCAAATGACCAGAAAGGTCATCTCAATGGATTTGATCAAACCCAGAAATCAAAGTGGTATTCTGCGCCACCCCATGTTTCTTCCCAACAAGATTCATCCATGTTCAATTTTTCTCATTCATATAACAACACCCCTTTCATCTTCAAGGCTTGCCACTTCCCTGCTTCAAACCAGACCCACAATAAAGCTTTGGATCTTCAGCTATGCCTCAACTTGCAGTCAAATACAAGAAGCTGA 729 0.4266 MEKDVCCDLSSSSWDGENGHSVEKRLKLFGFELNPCVKESVEGDESVNSSNTVSSGGDQKTTQEQEKSSTRSDPDERKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINYYLQPFQSNVGFAHHASTPWFYDPSSYDNSEFTLYEESQISFNSNDQKGHLNGFDQTQKSKWYSAPPHVSSQQDSSMFNFSHSYNNTPFIFKACHFPASNQTHNKALDLQLCLNLQSNTRS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01176 242 MobiDBLite consensus disorder prediction 40 74 - -
Bach4g01176 242 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Bach4g01176 242 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Bach4g01176 242 FunFam zinc finger protein 5 49 132 - -
Bach4g01176 242 MobiDBLite consensus disorder prediction 43 63 - -
Bach4g01176 242 PANTHER ZINC FINGER PROTEIN 5 18 237 IPR044299 GO:0010090
Bach4g01176 242 Gene3D Classic Zinc Finger 53 129 - -
Bach4g01176 242 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01176 Bach-Chr4 8130230 8130958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01176 23 190 C2H2 Transcription Factor Family AT1G10480 43.169 3.04e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g01176 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01176 - - qsa:O6P43_033118 315.849