Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01151 ATGTCTTGGGTTCATTCAGAAATTCATCAAAGGAGTGGTGCTCTGACCAGCCATTCTGTTCTTTCATCTTCTTCTTCTACATTGCCTTACGGTTCTGACTTCCAAAAGCAATCAAGCCCACATCCAGTTTCTTCATCTAGCAGTAAAATAAGCCCTGCAGTTCTTTTTATTATAGTCATTCTGGCTGTTGTTTTTTTCATCTCTGGTCTCCTTCACTTGCTTGTTAGATATCTTGTAAAGCACAGGTCTTCTTCATCAATCTCTCAATCCAATAGATACCCAGATATGTCTGAACCTGATGCTTACCAGAGACAGTTACAGCAACTCTTCCATCTTCATGATTCAGGCTTAGATCAGGCTTTCATAGATGCTCTTCCCGTCTTCCTTTACAAAGAGATAATAGGTTTGAAAGAGCCGTTTGATTGCGCTGTTTGCCTTTGTGAATTCTCAGAAGAAGACAAACTCAGATTGTTACCCATGTGCAATCATGCTTTTCACATTGACTGCATAGACACATGGTTACTGTCTAATTCAACTTGTCCTCTCTGTAGAGGTACCCTTTATGCACCGGGCTTTGCATTTGAAAACCCAGTTTTTGACTTTGAAGATCCAAGGGAAGAAGATGGGGCCTCAGTCAGTGGTGGTGGTGGGGCTGGTTCTTTCCACAAACCTGCAGAAAATGACATTACTGTTGGAAAAAGGGTGTTTTCTGTTAGACTTGGAAAATTTAGAAGTTCAAACAATGGACAGGGAGTAGAAGGAGGTGAAGGGGAGAGTAGTAACAGGAAGTTGGATGCAAGAAGATGCTATTCAATGGGATCTTGCCAATATGTGGTCGCTGATTCAGACCTGCGTGTGGCTTTATGCCATGATAGAGTTAATGGAAGTACCAGCGGCAGTTTTAGACAATTGAAAGGGAGAGCAATCCACAATGGGAATTCTTCAACCGAAGGGGATGCAGAGGGCAAAAAACTTAACCTTGCCAGGAAAGGTGAAAGCTTTTCGGTTTCCAAGGTCTGGCTATGGTCCAAGAAAGATAAATTGCCAAGTTGTTCAGAAACCCACATGGGCAATTCTACTGTCACTGCGAATTCACCATGGATGATCAGAACAAGAGGTACATGA 1125 0.424 MSWVHSEIHQRSGALTSHSVLSSSSSTLPYGSDFQKQSSPHPVSSSSSKISPAVLFIIVILAVVFFISGLLHLLVRYLVKHRSSSSISQSNRYPDMSEPDAYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIIGLKEPFDCAVCLCEFSEEDKLRLLPMCNHAFHIDCIDTWLLSNSTCPLCRGTLYAPGFAFENPVFDFEDPREEDGASVSGGGGAGSFHKPAENDITVGKRVFSVRLGKFRSSNNGQGVEGGEGESSNRKLDARRCYSMGSCQYVVADSDLRVALCHDRVNGSTSGSFRQLKGRAIHNGNSSTEGDAEGKKLNLARKGESFSVSKVWLWSKKDKLPSCSETHMGNSTVTANSPWMIRTRGT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01151 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 45 340 - -
Bach4g01151 374 Pfam Ring finger domain 141 184 IPR001841 -
Bach4g01151 374 CDD RING-H2_EL5-like 141 184 - -
Bach4g01151 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 189 IPR013083 -
Bach4g01151 374 SMART ring_2 142 183 IPR001841 -
Bach4g01151 374 FunFam RING-H2 finger protein ATL46 104 189 - -
Bach4g01151 374 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Bach4g01151 374 SUPERFAMILY RING/U-box 121 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01151 Bach-Chr4 7954441 7955565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01151 43 347 C3H Transcription Factor Family AT2G18650 40.597 3.71e-55 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01151 - - qsa:O6P43_025322 480.33