Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01108 TTTGGTTACTGATTCTTCATCTGTAATTGTGTCGAATTTGGCATTTTGTTTTGGCCTTTGTGTGTTTGGTTCTTTTGGAGTGAGTGAGTTTCTTGCTCTTTACACTGGGTGTGAATATGAAAGAAGATAATGGTCGTGGAATCACCGGGAACCAACCCAGAGAGGCTAGAAACCAACAACAAACTCACATGGAATTTGTGGGGATTGTCCAAAACATATAGAAATCAAGCCCAGCATTCTCAGATCTCAAGGATCTCAGAATTTCAGGCTTGAGGTTTGCTTTATTCTCAGGAAATTTTCCGGCTTTTTGCTGCTTCTCTGAGCTCAAGTACCACTCATTCGTCAAGGTTCGATTCAAATTATCCATTCTCGAGCTGGTTCCATAGTGGGAAAGCATTTTTGGCATCTGGGTCTTGGTTTAATGCTCATTAAGTTGGCTTTTAAGTTGAAAGTGAAGTTACTATTTTGGTGAAGAGTGGGCTTTGCTTTGTGGGAATCTGATTCCCCGAGCACCTTTTTGTCTGGATAAGGCGATGCAGGTTTAACTTCTTGTGGGAATGGCTGGTAGAATTGTTAATTATGGTGTCTTTGAGCTGTGGCTGCTGGCTGTGTAAAGAAAACAGAGTTGCTGAACTGAGCGTTAACTCCAGTGAGTATGGAAACGAGTGGTTCAAGATTCTGGTTACTGGGTGTGCTGGTTCTGGCGTTGCTGGAGGTTTCTTCTGCGGCCCTTTCTCCTTCTGGGATAAACTATGAAGTTGTAGCTCTGATGGCCATAAAAACTGCCCTGGTTGATCCACATAACGTCCTTGAGAATTGGGATGTTAATTCTGTCGATCCTTGTAGCTGGAGGATGGTTACTTGTTCGGCAGATGGCTCTGTTTCTGCTTTGGGATTTCCTAGTCAGAATTTGTCTGGTACACTATCTCCTGGGATTGGAAACTTAACTAACTTGCAATCTGTGTTGCTGCAGAACAATGCCGTTTCTGGTCAAATTCCTTCTGCTATTGGAAAGTTGGAAAAGCTTCAGACACTTGATCTCTCCAATAACGCATTTACTGGAGGGATACCCAGTTCATTGGGAGGTCTCAAGAACCTAAATTATTTGCGGTTGAATAATAATAGCCTCCAAGGAGCCTGCCCTGAATCTCTTGGCAACATTGAAGGTCTAACCCTTGTGGACCTTTCTTACAACAATCTGAGTGGTCCCTTGCCAAGAGTATCAGCTAGAACATTCAAGATTTTGGGTAATCCTTTAATTTGTGGTCCAAAGGCTAATAATTGCTCCACTGTTTTGCCGGAGCCACTTTCCTTCCCACCAGATGCTTTGAAAGCACAATCAGACTCTGGTACAAAAAGCCATCGTGTGGCAGTTGCTTTTGGTGCAAGTTTTGGGGCAGCTTTCATTATCGTGATTATTATTGGCTTTCTTGTTTGGTGGCGATATAGACGCAACCAGCAGATATTCTTTGATGTTAACGAACAATATGACCCTGAGGTGCGCCTTGGTCATTTAAGAAGGTACACATTCAAGGAGCTCCGAGCTGCTACAGATCATTTCAATTCGAAGAATATTCTAGGGAGGGGAGGTTTTGGAATAGTCTACAAGGGGTGTTTGAATGATGGGTCTGTTGTAGCAGTTAAAAGATTGAAGGACTATAATGCTGCTGGTGGTGAAATTCAATTTCAGACAGAAGTTGAGACGATAAGTTTGGCCGTTCATCGGAATCTTCTTAGGCTTTGTGGTTTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCATATATGTCCAATGGAAGTGTAGCGTCTAGATTAAAAGATCATATTCATGGTCGGCCAGCTTTAGATTGGGTTAAGAAGCTGCATCAGGACGGAAGACTAAGTCAAATGGTGGATAGAGATTTAAAGGGAATTTTTGACCCGGATGAATTGGAAGAAATGGTTCAGGTTGCACTGTTATGTACACAATTCAATCCTTCTCACCGTCCAAAGATGTCTGAAGTATTAAAAATGTTGGAAGGTGATGGCTTAGCTGAGAAGTGGGAGGCCTCACAGAAGACTGAGACGCCAAGGTTCAGGTCTTGTGAAAACCCCCCACTAAGATACTCAGATCTTATAGGAGAATCTTCACTCATAATAGAAGCTATGGAGCTTTCTGGCCCTAGGTGA 2173 0.4275 METSGSRFWLLGVLVLALLEVSSAALSPSGINYEVVALMAIKTALVDPHNVLENWDVNSVDPCSWRMVTCSADGSVSALGFPSQNLSGTLSPGIGNLTNLQSVLLQNNAVSGQIPSAIGKLEKLQTLDLSNNAFTGGIPSSLGGLKNLNYLRLNNNSLQGACPESLGNIEGLTLVDLSYNNLSGPLPRVSARTFKILGNPLICGPKANNCSTVLPEPLSFPPDALKAQSDSGTKSHRVAVAFGASFGAAFIIVIIIGFLVWWRYRRNQQIFFDVNEQYDPEVRLGHLRRYTFKELRAATDHFNSKNILGRGGFGIVYKGCLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMSNGSVASRLKDHIHGRPALDWVKKLHQDGRLSQMVDRDLKGIFDPDELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAEKWEASQKTETPRFRSCENPPLRYSDLIGESSLIIEAMELSGPR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01108 505 SUPERFAMILY L domain-like 32 193 - -
Bach4g01108 505 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 392 466 - -
Bach4g01108 505 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Bach4g01108 505 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 212 - -
Bach4g01108 505 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bach4g01108 505 ProSiteProfiles Protein kinase domain profile. 302 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g01108 505 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Bach4g01108 505 Gene3D Transferase(Phosphotransferase) domain 1 379 475 - -
Bach4g01108 505 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Bach4g01108 505 Pfam Protein tyrosine and serine/threonine kinase 305 392 IPR001245 GO:0004672|GO:0006468
Bach4g01108 505 SUPERFAMILY Protein kinase-like (PK-like) 287 402 IPR011009 -
Bach4g01108 505 FunFam Somatic embryogenesis receptor kinase 1 271 378 - -
Bach4g01108 505 SUPERFAMILY Protein kinase-like (PK-like) 397 459 IPR011009 -
Bach4g01108 505 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01108 Bach-Chr4 7573918 7578382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01108 398 505 Receptor kinase-like Gene Family AT1G60800 64.655 8.46e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach4g01108 Pkinase 1.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01108 - - gmx:100806943 675.626