Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01106 TACAGTTCCTCTCCCCAAAAATCGCACGCCTCGATAACACAATACTCACGATATCTTCCTCTCCTGCTGCACTTGCTGCTTGCTTGCCCAGTCTTCTTTAAATTCTTATTTATTTATTAACATTAAACATTTAATTATTATTATTATATTATTATTATTATTATAATAAAGATTGGATAATCTTCTCCTCGCAATCGATAATTTATATAAGAGGAAAAAAGTGTTTTAAGAAATAATCATTAAAGCGATTTAGAAGTGTTATTTATTTTATTTTTATTTCTAGTTCTAGAAGAAGTCTGGCTGTGGCAGGAGCAGCAGGGAAGATAAGCAGTAACAACACAACGTTGTGCTCATGGAGGAAATGTACGGACTGCCATCGACGGGGGAGATTTCAGAGAAGGCGTTGATGACGCCGGAGAATCTGATCTTACCAGCGGATTATCAGAGCTATTTCATGTCCTCTGGCGTGTTTCGTGATCGGATTCCGATGTTCGGACCGGACGAGTTGGTCTCTGCTGCTTCCGTGATTGCGGAAGCTGAAGCTTCCATCACTCCTAATGTTCAGCGCGAAGAGGACGCCTCCTTCTTTATCAAAGCAAAAATCGCCTCGCATCCTTACTATCCTCGTCTCCTTCAAGCTTACATCGATTGCCAGAAGGTGGGAGCGCCCCCGGAAATTGCATGTTTGCTAGATGAAATCCGGCGAGAAAACGACCTTTGTAAGCGAAACATTGTCTCCACGTGCTTTGGAGACGATCCCGAGCTCGACGAGTTCATGGAAACCTACTGTGACATGCTTGTCAAATATAAATCTGATCTAGCTCGCCCTTTTGATGAAGCAACGACGTTCCTCAACAAGATCGAAATGCAGCTCAGCGATCTACGAACTAGTGATTCTGTTCCAACAATTTCTGATGATGGGGGCGTGTCTTCAGAAGATGATTTTAGCACAGGAGATGGTGATGCTCAAGATGGTCAGTCACAGAGTGAAGATCGAGAGCTGAAGGATAGGCTTCTACGCAAGTTCGGTAGTCACATAAGTACTTTGAAGTTGGAGTTCTCAAAGAAGAAAAAGAAGGGTAAACTACCAAAAGAAGCCAGGCAAACGCTGCTTGAGTGGTGGAATGTTCATTACAAATGGCCATACCCAACGGAAGCTGATAAGATTGCACTGGCTAAGTCAACCGGGCTAGACCAGAAGCAGATTAACAATTGGTTTATAAATCAAAGAAAGCGTCACTGGAAACCATCAGAGAACATGATGGATAATCTGACTGGACGGTTTTTTACTGATTAACCAGGCGCTTGTACATTCTCAAATGTATATTCTGATTAATTAGTTATTGCTTGGGCTTCCCGTGTAGATTCTATATCAGAA 1378 0.4216 MEEMYGLPSTGEISEKALMTPENLILPADYQSYFMSSGVFRDRIPMFGPDELVSAASVIAEAEASITPNVQREEDASFFIKAKIASHPYYPRLLQAYIDCQKVGAPPEIACLLDEIRRENDLCKRNIVSTCFGDDPELDEFMETYCDMLVKYKSDLARPFDEATTFLNKIEMQLSDLRTSDSVPTISDDGGVSSEDDFSTGDGDAQDGQSQSEDRELKDRLLRKFGSHISTLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKIALAKSTGLDQKQINNWFINQRKRHWKPSENMMDNLTGRFFTD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01106 314 Gene3D - 235 308 - -
Bach4g01106 314 ProSiteProfiles 'Homeobox' domain profile. 236 299 IPR001356 GO:0003677
Bach4g01106 314 SMART ELK_2 216 237 IPR005539 GO:0003677
Bach4g01106 314 SMART KNOX2_2 128 179 IPR005541 GO:0003677|GO:0005634
Bach4g01106 314 CDD homeodomain 248 300 IPR001356 GO:0003677
Bach4g01106 314 ProSitePatterns 'Homeobox' domain signature. 274 297 IPR017970 GO:0000981|GO:0006355
Bach4g01106 314 SMART KNOX1_2 78 122 IPR005540 GO:0003677|GO:0005634
Bach4g01106 314 Pfam KNOX1 domain 80 121 IPR005540 GO:0003677|GO:0005634
Bach4g01106 314 MobiDBLite consensus disorder prediction 180 216 - -
Bach4g01106 314 Pfam KNOX2 domain 132 177 IPR005541 GO:0003677|GO:0005634
Bach4g01106 314 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 85 304 - -
Bach4g01106 314 MobiDBLite consensus disorder prediction 180 194 - -
Bach4g01106 314 Pfam ELK domain 216 237 IPR005539 GO:0003677
Bach4g01106 314 FunFam Homeobox protein knotted-1-like 2 241 303 - -
Bach4g01106 314 SMART HOX_1 238 303 IPR001356 GO:0003677
Bach4g01106 314 Pfam Homeobox KN domain 256 295 IPR008422 GO:0003677|GO:0006355
Bach4g01106 314 ProSiteProfiles ELK domain profile. 216 236 IPR005539 GO:0003677
Bach4g01106 314 SUPERFAMILY Homeodomain-like 237 308 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01106 Bach-Chr4 7545914 7553791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01106 1 314 Homeobox Transcription Factor Family AT1G23380 65.244 2.12e-142 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach4g01106 KNOX2 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01106 - - gmx:100803730 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01106 4 7545914 7553791 Bach10g00909 10 6445605 6453282 BWGD
Bach4g01106 4 7545914 7553791 Bach4g01106 4 7545914 7553791 ECH