Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01078 ATGGCTCTCCTGCTTGGAGGAATACAACCTCAGTTAGTGTCTTCGATCCCTCATCAACATAGAAAGCCTGTAATCAAATTGTCTCACCAGCGCAGCTTTCGTTTTGCGGCTAATAATAGAATTCGAGTTGTCTTGTCCAATGATCATTTCAATTCCAGAAGCGTGATTGTAAAATCAGCGTCTGTGAATGGGGTTTCGATTCAGAACAGGCCAGAAGGTTTAAGCGAAGGCCGTGGGGATGACAATGTTGCACTTATGGAGAGGCTTCGGAGATGGGTTGGTTTCCTTCCTTCGATTTTGCCTGGTGGTAGTTGGTGGAGCTTCTCCGATTCCGTTGAAGTTCAAAATTTAGCTAAACCGGTAACCGTGTCGCGCGCGCTTTCCAAAATGTGGGAACTGGTTGCTCAAGAGCGATGGGTTATTGTGGCGGCATTCTCTGCTTTAATTCTTGCTGCGGTTTCGGAGATTTCCATACCACATTTCTTGACAGCATCCATCTTCTCCGCACAGAGTGGGGAAATTGCAGTTTTCCACCGGAATGTGCGTCTCTTGGTTCTAATGTGTATGACTTCGGGAATATGCAGTGGGATAAGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTCAGAAAATGAGGGAAACATTATACTCCTCCCTTCTACTTCAGGATATATCATTTTTTGACACTGAAACAGTTGGTGATTTGACAAGTAGGCTAGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACCTGATATTCCGCAATGTTCTTCAGGGGACAGGTGCATTGGTTTACTTGCTGATTTTGTCTTGGCCACTGGGTTTATCTACATTGATGATATGCTCTATGTTATCCGCAATTATGCTACATTATGGGAGGTACCAGAAAAAGGTTGCAAGGTTAATCCAAGAAGTCACTGCTTCTGCAAATGAAGTAGCTCAAGAGACGTTCTCTTTGATTAGGACTGTCCGTGTTTATGGTACAGAAGAAGAAGAAGTTGGAAGGTACAAAGGGTGGCTAGGAAAATTAGTTCACATAAGCTTGCGACAAAATGCTGCTTATGGATTTTGGAATTTCAGTTTCAATACTCTTTATCATTCAACTCAGGTTATCGCTGTGCTGTTTGGAGGAATTTCTATCCTAAGAGGTCATATTACAGCAGAGACACTTACCAAGTTTATACTATACAGTGAATGGTTAATTTTTTCAACTTGGTGGGTGGGAGACAATATATCCAATTTGATGCAATCTGTTGGGGCTAGTGAAAAAGTATTCCATTTGATGGATCTCTCGCCCAGCAGCCAATTCACGTCAAAAGGAAAAGAGTTGCAGAGATTAAAGGGGGATATTGAGTTTAGAAATGTTTCTTTTCATTATGCTTCAAGGCCAACGGTACCCGTACTGCAAAATGTATGCATTGATGTACGTCCTAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACATTGGTGAACCTTTTGCTCCGTTTATACGAGCCAACAAATGGCCAGATTTTGATTGACGGCGTCCCTCATAACGAGTTGAACGTCATGTGGTGGAGAGAAAGAATTGGATTTGTGGGACAGGAACCCAAGCTCTTCCGGATGGATATTAGTTCAAACATTAGATATGGATGCACTCGAGATGTAAAGCAGGAGGATATTGAATGGGCTGCCAAGCAGGCCTATGCTCATGACTTTATCTCAGCACTTCCTAATGGTTATCAGACACTGGTGGACGATGATCTGTTAAGTGGAGGACAGAAGCAGCGAATTGCTATTGCTCGGGCCATTCTAAGGGATCCAAAAATATTGATTCTCGATGAAGCCACTAGTGCACTGGATGCTGAGAGTGAACATAATGTCAAGGGTGTTCTTCGTGCTGTCAGAAGTGACTTGACAACAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACAATACAAGCAGCTGATAGGATCGTAGTAATGGATAGTGGTCGAGTTGTTGAGAATGGAAGTCACGGAGAACTGCTCTTAAAAAATGGCCTATATGCGCGACTGAACAGAAAGCAGGCTGATGCCGTGGCGTGA 2109 0.4324 MALLLGGIQPQLVSSIPHQHRKPVIKLSHQRSFRFAANNRIRVVLSNDHFNSRSVIVKSASVNGVSIQNRPEGLSEGRGDDNVALMERLRRWVGFLPSILPGGSWWSFSDSVEVQNLAKPVTVSRALSKMWELVAQERWVIVAAFSALILAAVSEISIPHFLTASIFSAQSGEIAVFHRNVRLLVLMCMTSGICSGIRGCCFGIANMILVQKMRETLYSSLLLQDISFFDTETVGDLTSRLGADCQQVSRVIGNDLNLIFRNVLQGTGALVYLLILSWPLGLSTLMICSMLSAIMLHYGRYQKKVARLIQEVTASANEVAQETFSLIRTVRVYGTEEEEVGRYKGWLGKLVHISLRQNAAYGFWNFSFNTLYHSTQVIAVLFGGISILRGHITAETLTKFILYSEWLIFSTWWVGDNISNLMQSVGASEKVFHLMDLSPSSQFTSKGKELQRLKGDIEFRNVSFHYASRPTVPVLQNVCIDVRPSEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGVPHNELNVMWWRERIGFVGQEPKLFRMDISSNIRYGCTRDVKQEDIEWAAKQAYAHDFISALPNGYQTLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRAVRSDLTTRRSVIVIAHRLSTIQAADRIVVMDSGRVVENGSHGELLLKNGLYARLNRKQADAVA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01078 702 Gene3D - 447 698 IPR027417 -
Bach4g01078 702 Pfam ABC transporter transmembrane region 148 409 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach4g01078 702 PANTHER ABC TRANSPORTER B FAMILY 130 693 IPR039421 -
Bach4g01078 702 Pfam ABC transporter 475 623 IPR003439 GO:0005524
Bach4g01078 702 CDD ABC_6TM_TAP 144 431 - -
Bach4g01078 702 SUPERFAMILY ABC transporter transmembrane region 129 437 IPR036640 GO:0005524|GO:0016020
Bach4g01078 702 Gene3D ABC transporter type 1, transmembrane domain 110 287 IPR036640 GO:0005524|GO:0016020
Bach4g01078 702 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 142 423 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach4g01078 702 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 457 696 IPR003439 GO:0005524
Bach4g01078 702 FunFam ABC transporter B family member 26, chloroplastic 123 442 - -
Bach4g01078 702 FunFam Multidrug ABC transporter ATP-binding protein 449 701 - -
Bach4g01078 702 ProSitePatterns ABC transporters family signature. 595 609 IPR017871 GO:0005524|GO:0016887
Bach4g01078 702 SMART AAA_5 484 673 IPR003593 GO:0016887
Bach4g01078 702 Gene3D ABC transporter type 1, transmembrane domain 288 699 IPR036640 GO:0005524|GO:0016020
Bach4g01078 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 697 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01078 Bach-Chr4 7355563 7360906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01078 212 700 Calmodulin-binding Proteins AT2G36910 35.141 4.45e-74 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01078 - - jre:108992903 1061.98