Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01061 ATGGCAGAAAGATTTGAGCGTACGACCTCAAGGCTTCTGTGTTCGGAGAACAGCAACACTTGCTTTAGTGATTTCGAATGTAATGCCGCAGATGAGTCTAGAATTTCCCCTTTACGGAACCAACAAAACATTAACGTTAACCTTCATTATCTGAGTTCGGGCAGCCATGGATCGGAATGCTTTATGGGTTTTCCAGTACAGAGTGAAGAAAGAATCAGGGTGATGATTGAGAGGGAGAGAGAACATTTGCCCAGAGATGATTACTTGAAGAGGCTGCGTAGTGGGGGGTTTGATTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATATGGAAGGCTCATGCTTATTATGGCTTTGGACCATTGAGCTTGTGTCTGTCTATGAACTACTTGGATCGCTTCCTGTCGATATATGAATTACCTAGAGGTAAAGCCTGGACCGTGCAATTGTTAGCTGTTGCTTGTTTGTCAATTGCAGCTAAAATGGAGGAGACTAAAGTGCCTCAATCTGTAGATTTACAGGTGGGAGAACCGAAATTCGTTTTTGAGGCTAAAACCATACAAAGAATGGAGCTTCTAGTTTTAAACACATTGAGATGGAAAATGCTAGCTGTAACTCCTTGTTCCTTCATAGACTACTTCCTCAGAAAAATCAACCCTGAACAGCATCCAACCGAGTCATCCATTTCTAGATCAGTACAGCTCATACTTAGCACAATCAGAGGTGTTGACTTATTGGAATTCAGGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTCAGTTTCAGGAGAACTGCAAGCAATTGAAATTGATGAGGACGTATCTTGTTTCTTGATTCTAGAAAAGGAGAGAGTTCTCAAATGTCTTGAACTAGTCAGAGATTTGTCACCAGTTTGTGTTTCTGCTGATTTGGGCAGTAAATCAATGCCATTGGTGCCCCAAAGCCCTCTTGGTGTGTTGGATGCTACATGCTTGAGCTATAAAAGTGATGAATTAACAGTTGGGTCATGTCCAAATTCTTCTCATAATAGTCCAATTACTAAGAGGAGCAAATCAGAGGGACCTTCTGATATGACTTCCAAGTCATGA 1086 0.419 MAERFERTTSRLLCSENSNTCFSDFECNAADESRISPLRNQQNINVNLHYLSSGSHGSECFMGFPVQSEERIRVMIEREREHLPRDDYLKRLRSGGFDLSVRREALDWIWKAHAYYGFGPLSLCLSMNYLDRFLSIYELPRGKAWTVQLLAVACLSIAAKMEETKVPQSVDLQVGEPKFVFEAKTIQRMELLVLNTLRWKMLAVTPCSFIDYFLRKINPEQHPTESSISRSVQLILSTIRGVDLLEFRPSEIAAAVAISVSGELQAIEIDEDVSCFLILEKERVLKCLELVRDLSPVCVSADLGSKSMPLVPQSPLGVLDATCLSYKSDELTVGSCPNSSHNSPITKRSKSEGPSDMTSKS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01061 361 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Bach4g01061 361 FunFam D6-type cyclin 199 289 - -
Bach4g01061 361 Pfam Cyclin, N-terminal domain 72 201 IPR006671 -
Bach4g01061 361 PANTHER CYCLINS 68 284 IPR039361 -
Bach4g01061 361 SMART Cyclin_C_2 204 339 IPR004367 -
Bach4g01061 361 SMART cyclin_7 107 195 IPR013763 -
Bach4g01061 361 Pfam Cyclin, C-terminal domain 204 295 IPR004367 -
Bach4g01061 361 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Bach4g01061 361 CDD CYCLIN_AtCycD-like_rpt2 204 291 - -
Bach4g01061 361 MobiDBLite consensus disorder prediction 333 361 - -
Bach4g01061 361 FunFam D2/4-type cyclin 85 198 - -
Bach4g01061 361 Gene3D - 85 202 - -
Bach4g01061 361 Gene3D - 74 289 - -
Bach4g01061 361 SUPERFAMILY Cyclin-like 65 201 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01061 Bach-Chr4 7238816 7240861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01061 62 270 Core Cell Cycle Gene Families AT5G65420 64.623 1.80e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01061 K18810 - qsa:O6P43_025224 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01061 4 7238816 7240861 Bach10g00875 10 6190873 6192794 BWGD