Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01056 ATGGTTATACTTCGACAGGTAGCAGCTTGTCTTTCTCTTCATTTTAAGGTTCTTATAAATCTCAGTTCCTCCTACAAATTTGCTTGCCTTCATGGTTTCGCAATGCAGCACATTCGAAATTACTATAATTCTGGAGCACAAAATATGATAAGAAGCACCTTTCATCGAGGGATGATCTCAGAGACATACAAAAACTCTTTCTTGAAACCAAAATCAAAGGAAGAAAAAAAGATTGAAGGAAAAAAGAAACATAAGGAAGCAGAGCAGAGACGTAGGGATCGAATCAAAGGCCAATATGCAACCCTTCGTGCAGTCCTTCCCAAATTAGTCAAAACAGACAAGGCATCAATACTGGGAGAGGCTATAAGGCAAGTGATGGAGCTGAAGAAGAATGCATCAGAACTAGAAGCAGCTAAAGGAGGTAGCACAGAGGGGGTAGTGTTTCCCAGTGGAGCAGACAAGTTGAATTTGGAGTTCTGCAATTATGAGCAGGGCCTCATGAAGGCTACGTTGAGCTGTGAAGATAGGCCAGGTTTGATGTCAGCCATTGAAAGTGCGCTAAGGGAAATCAATGCCAATGTGGTGAAGGCTGAGATGATAACAGTGGGTGGGAGGACCCGAAGTGTGTTATGGGTGCAAGGTTTGGATTGTAGAAATGAAGGGATGGAAATGCTAAAGAGGACTATCAAGCTTGTGATGCAAAGGCCAACTTCGCCGGGTTTTCGTCGGCTGCCGCGGTACACTCGATACTAG 753 0.4382 MVILRQVAACLSLHFKVLINLSSSYKFACLHGFAMQHIRNYYNSGAQNMIRSTFHRGMISETYKNSFLKPKSKEEKKIEGKKKHKEAEQRRRDRIKGQYATLRAVLPKLVKTDKASILGEAIRQVMELKKNASELEAAKGGSTEGVVFPSGADKLNLEFCNYEQGLMKATLSCEDRPGLMSAIESALREINANVVKAEMITVGGRTRSVLWVQGLDCRNEGMEMLKRTIKLVMQRPTSPGFRRLPRYTRY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01056 250 CDD ACT_UUR-ACR-like 170 216 - -
Bach4g01056 250 MobiDBLite consensus disorder prediction 70 93 - -
Bach4g01056 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 140 IPR036638 GO:0046983
Bach4g01056 250 Gene3D - 76 144 IPR036638 GO:0046983
Bach4g01056 250 SMART finulus 85 134 IPR011598 GO:0046983
Bach4g01056 250 PANTHER TRANSCRIPTION FACTOR BHLH30 51 238 IPR045847 GO:0003700|GO:0006355
Bach4g01056 250 ProSiteProfiles ACT domain profile. 168 249 IPR002912 -
Bach4g01056 250 SUPERFAMILY ACT-like 170 232 IPR045865 -
Bach4g01056 250 Coils Coil 118 138 - -
Bach4g01056 250 Gene3D - 168 236 - -
Bach4g01056 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 128 IPR011598 GO:0046983
Bach4g01056 250 Pfam Helix-loop-helix DNA-binding domain 81 126 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01056 Bach-Chr4 7164111 7165018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01056 74 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 38.889 6.45e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g01056 HLH 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01056 - - pcin:129311482 236.884