Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01052 ATGGTCTTCTGGTTGCGTCTGTCACCATCCGCGTCTTCAGGTTGCGTCTCGTCGTCGCTGGTCTGGTCTAGTTTCCTCCCACTGCGTCTTTCGGTCTGGTCGCGGTGCTCTGGTCGTGGGATGCCATTGCTGGTTGCTGGATGGGGCGCAGCGTACCCTTTTGCTTTTGCTTCACTCGAAGACACCAAAAGCAATTGCTACTCCATAAATAGTCAACCTTCTTTTTCTTTGGTTGCTTTTCCGTTGCCCTTTAAGGAGTCAATGGCGAGGGAGAAGATTCAGATTAAGAAGATTGACAACGCCACGGCGAGGCAGGTGACGTTCTCAAAGAGACGCAGAGGGCTATTCAAAAAAGCTGAGGAGCTTTCTGTCCTCTGTGACGCAGATGTTGCTCTCATTATCTTCTCTACTACTGGGAAGGTCTTCGACTATGCCAACTCAAGTATGAAGGAAATACTAGAGAGGCATCATCTGCACTCAAAGAACCTGGCAAAGATGGAACAACCCTCTCTTGAGTTGCAGTTAGTTCAGAACGTCAACCACTCCAGATTGAGCAAAGAAATTGCTGAGAAGAGCCATAGACTCAGGCAGATGAGAGGAGAGGATCTCCGAGGTTTAAATATAGAGGACCTACAGCAGCTAGAGAGGACTCTTGAAGTAGGGTTGGGCCGTGTAATAGAAAAGAAGGGAGAAAAGATCATGAATGAAATCAGTGAGCTTCAAAGCAAGGGAATGGAATTGATGGAAGAGAACGAACAGTTGAGGCGACAAGTGGCGGAAATATGTAACAGCAGAAGGGGTGGTGGTGGTGAGTCAGACAACTTAATTATCGAAGAAGGTCAGTCATCGGAGTCCATCACTAATGCTTGCAACTCCGGTGGCCCTCCTCAAGATTATGATAGCTCAGACACCTCACTCAAGTTGGGGCTACCTTACTCGGGTTGAAGGGAATGTATAACGAGTCAATCAACTTAATTGTAACTTGTAAGCCAAGATAAAGAAAGACAATGCTCTAAATTTGGAAACTAAGTATGACTTTACTTTTTTACCCTGACAGGCG 1060 0.466 MVFWLRLSPSASSGCVSSSLVWSSFLPLRLSVWSRCSGRGMPLLVAGWGAAYPFAFASLEDTKSNCYSINSQPSFSLVAFPLPFKESMAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSTTGKVFDYANSSMKEILERHHLHSKNLAKMEQPSLELQLVQNVNHSRLSKEIAEKSHRLRQMRGEDLRGLNIEDLQQLERTLEVGLGRVIEKKGEKIMNEISELQSKGMELMEENEQLRRQVAEICNSRRGGGGESDNLIIEEGQSSESITNACNSGGPPQDYDSSDTSLKLGLPYSG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01052 314 ProSiteProfiles MADS-box domain profile. 88 148 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 MobiDBLite consensus disorder prediction 264 314 - -
Bach4g01052 314 SMART madsneu2 88 147 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 MobiDBLite consensus disorder prediction 276 314 - -
Bach4g01052 314 ProSitePatterns MADS-box domain signature. 90 144 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 Gene3D - 100 170 IPR036879 GO:0003677|GO:0046983
Bach4g01052 314 SUPERFAMILY SRF-like 90 171 IPR036879 GO:0003677|GO:0046983
Bach4g01052 314 CDD MADS_MEF2_like 89 164 IPR033896 GO:0000977|GO:0045944
Bach4g01052 314 ProSiteProfiles K-box domain profile. 174 264 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach4g01052 314 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 97 144 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 PRINTS MADS domain signature 125 146 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 PRINTS MADS domain signature 90 110 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 PRINTS MADS domain signature 110 125 IPR002100 GO:0003677|GO:0046983
Bach4g01052 314 PANTHER SERUM RESPONSE FACTOR HOMOLOG 90 256 - -
Bach4g01052 314 FunFam Transcription factor, MADS-box 100 170 - -
Bach4g01052 314 Pfam K-box region 180 258 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach4g01052 314 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01052 Bach-Chr4 7123660 7130113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01052 88 314 MADS-box Gene Family AT2G22540 70.833 2.23e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach4g01052 K-box 9.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01052 - - gmx:100789126 369.007