Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01043 ATGGCGAGAGCAACTCACTGGCTATCGTTTGCTTCGCCGGAAATGCTGAGGCCCTCGGAACCTCAGTTTGTTCAATACGACAGCTCGTCTGCTAGCTCTCACTACTTCATCGACACCTACTTTGCGAACGGCTGGGGAAATCCCAAGCCACAAGTTCTGTACACACCAGTAGAGCAAAACCAGAGCAAAGATAACCGAGCACAGAGCATGGCGGAATCATCCTTTCTCACAAGCTCCATGAACCCACACAATCAAAACCAAGAAGTTCCCAAACTCGAAGATTTTTTGGGTGGTGATTCCTCCTCGATCATGCGCTACTCTGATAGCCAAACGGAGACTCAGGATTCATCGCTCACTCAGATATACGATCATGGCTCTGGCTATTTCAGTGACCAGCAGGATCTGAAAGCAATTGCTGGCTTTCAAGCTTTCTCCAGTAACTCGGGTTCTGAAGTCGATGACTCAGCCTCAATCGCCAAAATTCATACTACTGGCGCAGATTTCGCAACTCACTCCATTGAGTCATCCAGGAACGAGTTGGCCTTCTCTGGCTGCGCCACTGCTGGTGCTTTGTCTCTCGGCGTCACCCAAACTTCTGACAAGGCCATCGTGACGGTGGATTCTGATTCCTCCAAGAAGGTTGCTGATACCTTTGGCCAGCGAACTTCAATTTACAGAGGAGTCACCAGACATAGATGGACGGGGAGATATGAAGCGCATCTCTGGGACAACAGCTGTAGAAGGGAGGGTCAGGCGAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGAAAAGGCAGCAAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCACCGCTACCACCAACTTCCCTGTTTCCAACTATACAAATGAGTTGGAGGATATGAAACACGTGACAAAGCAAGAGTTCATTGCATCCCTGCGAAGGAAAAGTAGTGGTTTTTCACGGGGAGCTTCTATATACAGGGGTGTGACAAGGCATCATCAGCAAGGTAGATGGCAAGCAAGAATTGGTCGTGTTGCTGGCAACAAAGATCTATACCTTGGAACATTTGCTACTGAGGAAGAAGCAGCAGAGGCATACGATATTGCAGCCATAAAGTTCAGAGGAGCCAATGCTGTAACCAATTTTGAGATGAGCAGATATGATGTTGATGCTATCATCAAGAGTTCTCTTCCAATTGGTGGAGCAGCTAAACGGCTGAAGCTTTCCCTGGAATCTGAGCAGCAGAAGGACCTTGTGAACCGTAACCAGGAAGCTGAATGTAGAAACGTGAACAGCAGCATCAATTTCTCAGCCATTCAGCCAGTTGCTCCTATCCCATGTGGAATTCCCTTTGATTCTGCTACACCTTACTATCACTCCAACGTCTTCCACCATTATCTACCTAGTAGCACGGCCATTGCGGAGTCCATTGTATCTACCACCGCCGCAGATCCATTGACAGCACTGCCACCACCAACGGCAGCTCCCGAGTTTTTCATGTGGCCTCACCAGTCATATTGA 1515 0.4871 MARATHWLSFASPEMLRPSEPQFVQYDSSSASSHYFIDTYFANGWGNPKPQVLYTPVEQNQSKDNRAQSMAESSFLTSSMNPHNQNQEVPKLEDFLGGDSSSIMRYSDSQTETQDSSLTQIYDHGSGYFSDQQDLKAIAGFQAFSSNSGSEVDDSASIAKIHTTGADFATHSIESSRNELAFSGCATAGALSLGVTQTSDKAIVTVDSDSSKKVADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYTNELEDMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVDAIIKSSLPIGGAAKRLKLSLESEQQKDLVNRNQEAECRNVNSSINFSAIQPVAPIPCGIPFDSATPYYHSNVFHHYLPSSTAIAESIVSTTAADPLTALPPPTAAPEFFMWPHQSY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01043 504 FunFam AP2-like ethylene-responsive transcription factor ANT 223 289 - -
Bach4g01043 504 FunFam AP2-like ethylene-responsive transcription factor 322 383 - -
Bach4g01043 504 Pfam AP2 domain 224 279 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 Pfam AP2 domain 323 373 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 ProSiteProfiles AP2/ERF domain profile. 323 381 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 SUPERFAMILY DNA-binding domain 322 383 IPR016177 GO:0003677
Bach4g01043 504 PRINTS Ethylene responsive element binding protein signature 225 236 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 PRINTS Ethylene responsive element binding protein signature 363 383 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 419 - -
Bach4g01043 504 Gene3D AP2/ERF domain 323 383 IPR036955 GO:0003700|GO:0006355
Bach4g01043 504 Gene3D AP2/ERF domain 224 289 IPR036955 GO:0003700|GO:0006355
Bach4g01043 504 ProSiteProfiles AP2/ERF domain profile. 224 287 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 CDD AP2 322 383 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 SMART rav1_2 323 387 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 SMART rav1_2 224 293 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 CDD AP2 223 289 IPR001471 GO:0003700|GO:0006355
Bach4g01043 504 SUPERFAMILY DNA-binding domain 223 289 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01043 Bach-Chr4 7054553 7058755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01043 45 504 AP2-EREBP Transcription Factor Family AT5G10510 57.169 4.41e-175 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach4g01043 AP2 1.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01043 K09285 - qsa:O6P43_025207 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01043 4 7054553 7058755 Bach10g00861 10 6087933 6091841 BWGD