Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01029 ATGGCTCTGCTTTCTGAGACGACTTCCGTTAGGAGATCTTTAAGGAATAGTAACAGTACAAAACCGCCTTCTTCTCTTCCTGCAGTCAAGCTCAATGAGGAAGATCAACAGGTTGTAATTAACAACGGCATTGTTCGCGTCACTTTGTCAAAGCCGGAAGGCTATGTGCTTGGAGTATCATATAAAGGGAATGGCAATGTACTTCAAACTTCCAAACAGGATAATAGAGGGTACTGGGACGTTGTTTACAATGAACCAGGTGGTAGTGGCGGCTTCCAAAGAATCACAGCCACCCAATATTCAGTGGTTGTAGAAAATGAGGATCAAGTTGAGCTGTCATTTTCAAGGAATTGGAATGGCTCAAGTCTCCCTCTGAACATAGACAAAAGGTATATATTACGAAGAGGTGATGCAGGATTTTATGCATATGCAATATTTGAACACTTAGAAGGAATGCCAGCAGTGGAGATTGATCAAATTAGGATAGTCTTCAAGCTCCAGGAAAAAAGGTTCAAATACATGGCTGTATCAGACGACAGGCGAAGAAACATGCCAACCCCAGAAGACAGAGAAAGAGGACAGCGCCTTGCATACGATGAAGCTGTTCTCTTAACTAATCCAAGCGACCCAGAATTTAGAGGAGAGGTGGATGACAAGTACCAATACTCGGTTGAGAACCAAGACAACTCTGTTCATGGATGGATTAGTTTCGATTCTGATTCATCCGTGGGCTTCTGGATAATTACACCCAGCAACGAATTCCGTAATGCTGGACCCATCAAGCAAGATCTCACCTCCCATGTTGGCCCTACCTGCCTCTCCATGTTTGTCAGCACCCACTATGCTGGGAAGGTGGTGACTATGGCATTGGAAAATGGAGAGGCTTACAAAAAGGTTTTTGGCCCTGTTTTTGTCTACCTCAACTCCGCTTCAAACGACAATACTAACTATGTTTCAGCTTCACAAACGCTTTGGAAAGATGCTGTACAACAGATGTCTAAGGAATCCAAAAGCTGGCCCTATGATTTCCCTCAATCACAAGATTTCATTCCACCGAAGAAACGTGGAACTGTCTTGGGACAATTACTAGTCCAGGATGAGTACATCAAAGGGGGGAGATCTCTATCTGCTAGCTCTGCATATGTTGGTCTTGCTCTGCCTGGAGAACCGGGATCATGGCAGAAAGAAAGCAAGGGTTACCAATTCTGGACTCGAGCTGACAAGATGGGCAACTTCGAATTAGAACATATAGTACCAGGGGACTATAATTTGTATGCATGGGTTCCTGGCTTTCTTGGTGATTACATGTATAAATCCACCATTACCATTGCACCAGGTACAAGAAAATGTTCAAAATATCTTGTATCTTTAACTTGCAACCCCAAATTGATCATTGACAATGCCATGTTTTTCTCCGTAGGATGTTTCATCAGATTGGGTTCGCTTGTATATAATCCTCCAAGAAATGGCCCTACTGTCTGGGAAATTGGCATCCCAGATCGGTCGGCAGCAGAGTTCTATGTACCACAACCTTACCCTACTCTTATGAATAACCTGTATACTGAAAACACCAAAGAAAGGTTTAGGCAATACGGTTTGTGGGAACGTTATACTGAATTGTATCAGAATAGAGACCTCGTTTACACCATTGGTGTCGATAATTATCACAAAGATTGGTTCTACGCGCATGTCCCCAGGTATACGGGAAATAAGACGTATGAACCAACCACTTGGCAGATTGTTTTTGATCTTCCAAACGTAACAGAGAGTGGAAACTACACATTACAACTAGCCTTGGCATCAGCCACATATTCTGACCTGCAGGTTCGGTTCAATGATCCAAATGTTTCGCCGGCTCACTTCTCTACCGGTCGAATAGGGGAAGACAACGCCATAGCAAGGCACGGTATCCATGGATTGCATTGGTTGTTTAGCATTGATGTACCAAGCAGTCGATTAGTAGAAGGAAACAACACCATCTATTTAAAACAGTCAAAAGCCGAAACTCCTTTTGAGGGAGTTATGTATGACTATATTCGTTTAGAAAGGCCTCCATCTCCCAGGAACTTCAATTAG 2076 0.4321 MALLSETTSVRRSLRNSNSTKPPSSLPAVKLNEEDQQVVINNGIVRVTLSKPEGYVLGVSYKGNGNVLQTSKQDNRGYWDVVYNEPGGSGGFQRITATQYSVVVENEDQVELSFSRNWNGSSLPLNIDKRYILRRGDAGFYAYAIFEHLEGMPAVEIDQIRIVFKLQEKRFKYMAVSDDRRRNMPTPEDRERGQRLAYDEAVLLTNPSDPEFRGEVDDKYQYSVENQDNSVHGWISFDSDSSVGFWIITPSNEFRNAGPIKQDLTSHVGPTCLSMFVSTHYAGKVVTMALENGEAYKKVFGPVFVYLNSASNDNTNYVSASQTLWKDAVQQMSKESKSWPYDFPQSQDFIPPKKRGTVLGQLLVQDEYIKGGRSLSASSAYVGLALPGEPGSWQKESKGYQFWTRADKMGNFELEHIVPGDYNLYAWVPGFLGDYMYKSTITIAPGTRKCSKYLVSLTCNPKLIIDNAMFFSVGCFIRLGSLVYNPPRNGPTVWEIGIPDRSAAEFYVPQPYPTLMNNLYTENTKERFRQYGLWERYTELYQNRDLVYTIGVDNYHKDWFYAHVPRYTGNKTYEPTTWQIVFDLPNVTESGNYTLQLALASATYSDLQVRFNDPNVSPAHFSTGRIGEDNAIARHGIHGLHWLFSIDVPSSRLVEGNNTIYLKQSKAETPFEGVMYDYIRLERPPSPRNFN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01029 691 CDD RGL4_C 494 682 - -
Bach4g01029 691 MobiDBLite consensus disorder prediction 1 27 - -
Bach4g01029 691 Pfam Rhamnogalacturonate lyase family 27 216 IPR010325 -
Bach4g01029 691 Gene3D - 490 682 - -
Bach4g01029 691 Pfam Polysaccharide lyase family 4, domain III 492 681 IPR029411 -
Bach4g01029 691 MobiDBLite consensus disorder prediction 1 26 - -
Bach4g01029 691 Gene3D - 28 326 IPR014718 GO:0030246
Bach4g01029 691 SUPERFAMILY Starch-binding domain-like 351 447 IPR013784 GO:0030246
Bach4g01029 691 SUPERFAMILY Galactose mutarotase-like 31 315 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bach4g01029 691 CDD RGL4_N 29 315 - -
Bach4g01029 691 SUPERFAMILY Galactose-binding domain-like 489 682 IPR008979 -
Bach4g01029 691 CDD RGL4_M 354 446 IPR029413 -
Bach4g01029 691 Pfam Polysaccharide lyase family 4, domain II 378 447 IPR029413 -
Bach4g01029 691 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 32 685 - -
Bach4g01029 691 Gene3D - 350 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01029 Bach-Chr4 6960262 6963984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01029 29 684 Polysaccharide Lyase AT1G09890 53.394 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01029 K18195 - gmx:100776664 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01029 4 6960262 6963984 Bach10g00840 10 5951928 5955354 BWGD