Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01016 AAGCTTTCTCTCTCTTTCTGCGTTGCCTTCACTGCCTTTTTCTTTGCATTTTCCTGCTAGAAAAAAAGTTTTGAAGAATAATCGCTCTTCTTCTCTGTCTGATCTACCAAAACTTTGCTAGTTTATAACATACCCATCTGGACTCTTATGTCTCCATCGGTAATAGTTGCCGAGGAGGGGCAGAGCAACGTCTCAACAGTTGCATCTTCAGTATCCTCGGACTGTGTCTCTCAGAATGGGACTGGATTGAAAGAACGCAATTACCTAGGATTGTCAGATTGCTCATCAGTGGACAGTTCTAGTTACCCAAGCTTGTCTGATGAGAAAAAAGACAACTTGAATCTGAAGGCTACAGAATTACGGTTGGGTCTTCCTGGATCCCACTCGCCTGAAAGGGAAGGAGATCTTTACTTGTCGAGCTCAAAAAAACTTGATGAGAAGCCACTCTTTCCTTTGCTTCCTACGAAAGATGGAATATGTTCATCCTCACAGAAGACAATTGTTTCAGGCAACAAAAGAGGATTCTCTGACACCATAGATGTGTTTCCTGAGGGTAAATTTCCTGTTAATTCAGGGATAAATGCAATGCTATCCCCTAGACCTTCTGGAGCTCAGCCGAATATAATGAAAGAGTTGCCAAGCAAGGTGGTCCAGGAACAGCCTTCTGCTGCTAATGGAACTGGTTATAACCATGCAGGTGCTTCTATCACCAACAGTGCACCAGCTGCCAAGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCATATAGGAAGAATTCATTGGCCACTAATTCAAAAATCAATGAGGAAGTTGACGGAAAACCAGGTCCTTCTGCTCTCTTTGTGAAGGTCAGTATGGATGGTGCTCCTTATTTAAGGAAGGCAGATCTTAGAAGTTATTCGACATACCAAGAACTATCTTCTGCCCTTGAAAAGATGTTCAGCTGTTTTACCCTAGGTCAGTGTGGCTCTCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAAAGCAAGTTGAGGGACCTACTGCATGGATCAGAATATGTACTTACTTATGAAGATAAAGATGGTGACTGGATGCTTGTAGGGGATGTACCATGGGAGATGTTCATTGACACATGCAAGAGGCTGAAAATCATGAAGGGGTCCGATGCCATTGGCTTGGCTCCGAGGTCCATGGAGAAGTCCAAGAGCAGGAGCTAGAGTGCACCTGGGACTGATGGGTGCATTTTGTCTAAGATACTGAGGGAATTAAGCGATGATCAAGGGCAGGATCCCTTTGTTTTGATGGATAATGATGGTTCAAATGTGTCCTTAGTTATGTTCATAAGTCCCTGAAAAGCTTGACTTATTCTGCGATTATCTTAGATTTGTTATTATTTGAACATAGTACGAAGCTATCTAATAGAATACTGTTCGTGGAGTCTGTAATCATTAAGAGGAACCTGTTTGTGTGAAGTTGGAATGTTTGTTTCTATCGATGGCTTCAAGATACTTTGTCTTGAGTTATTTGACACCCCCACCTTGAAGTTCGTTTGAGAACCTTACCAGCA 1550 0.4271 MSPSVIVAEEGQSNVSTVASSVSSDCVSQNGTGLKERNYLGLSDCSSVDSSSYPSLSDEKKDNLNLKATELRLGLPGSHSPEREGDLYLSSSKKLDEKPLFPLLPTKDGICSSSQKTIVSGNKRGFSDTIDVFPEGKFPVNSGINAMLSPRPSGAQPNIMKELPSKVVQEQPSAANGTGYNHAGASITNSAPAAKAQVVGWPPIRSYRKNSLATNSKINEEVDGKPGPSALFVKVSMDGAPYLRKADLRSYSTYQELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRSMEKSKSRS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01016 350 SUPERFAMILY CAD & PB1 domains 227 331 - -
Bach4g01016 350 ProSiteProfiles PB1 domain profile. 230 334 IPR000270 GO:0005515
Bach4g01016 350 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 337 IPR003311 GO:0005634|GO:0006355
Bach4g01016 350 FunFam Auxin-responsive protein 225 342 - -
Bach4g01016 350 Pfam AUX/IAA family 69 341 IPR033389 -
Bach4g01016 350 Gene3D - 227 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01016 Bach-Chr4 6829765 6834444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01016 232 335 B3 DNA Binding Superfamily AT5G37020 33.654 8.02e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach4g01016 AUX_IAA 7.2e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01016 K14484 - gmx:100789251 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01016 4 6829765 6834444 Bach10g00827 10 5846430 5849986 BWGD
Bach4g01016 4 6829765 6834444 Bach4g01016 4 6829765 6834444 ECH