Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01001 CAGGAGGTGTTTCAGCTGCAGCAGCCCCTGGGAATATCCTTCGTTAAATTTCATTCTCGGCTTTGATATCTTTCTCAGTCTCTAATGGCGTTCGAGAACTTCAACGACAAGAACGCTGTTTTCCGTAAACTTAAGGCGAAGGCAGAAAACAAGATGTGTTTCGATTGTAATGCAAAAAATCCAACCTGGGCATCGGTCACTTATGGAATCTTCCTCTGCATCGATTGCTCATCTGTTCACCGCAGTCTTGGCGTGCACATCAGTTTCGTGAGATCTACAAATTTAGACTCATGGACTCCTGAGCAACTAAAAATGATGAGCTTTGGAGGAAACAATCGTGCACAGGTATTTTTTAAGCAACATGGTTGGACTGATGGTGGTAAAATAGAGGCCAAGTATACATCCAGAGCTGCAGATTTGTATAGACAAATTCTTTCAAAGGAAGTAGCTAAGAGTATGGCCGAGGAGGGAGGTACGCAATCATCAACTGTTGCTTCTCAGTCTGCACAAGCAGGTGATGAACTTCCTGATGTCAGGACCAGTGAAGTACCAAAAGAGAACACTTTGGGGAAGCCAGAAATGCCTGAGAGCACTGCTTCACCAAAAGCTTCACATTCAATACTTTCTAATACTGTCAAGAAGACTATTGGTAGCAAAAAATCTGGGAAGAGTGGAGGACTTGGTGCCCGAAAGCTTACTACAAAGCCAAGTGAGTCTCTCTATGAACAGAAGCCTCAAGAGCCACCACCTGCTCCGGTTTCTTCCTCAACAAACAACAATCTGGCTGCTGGACCATCCTTCCCATCTCGGTTTGAATATGTAGAAAATGTCCAAACATCCGAATTGAATTCAGGTAGTGCACAAGTGATTGGCCATGTCACTCCTCCGAAGTCATCAAGCTTTTTCGCAGAATTTGGAATGGATAGTGGTTTTCCGAAGAAATCTGCATCAAACTCCTCAAAAGTGCAAATTGAGGAAACTGATGAAGCAAGAAAGAAGTTCTCAAACGCTAAATCTATTTCTTCGGCCCAGTTTTTTGGAGATCAGAACAAAACGGCGGATTCAGATGCTAAAGTTACTTTGTCAAAATTCTCAGGTTCAACTGCCATCTCCAGTGCTGATCTTTTTGGTCATCCATCAGATAATAACATTGATCTTTCCGCAAGTGACATGATCAATCGACTCTCGTTCCAGGCACAACAGGATATCTCTTCCCTTAAAAATATTGCAGGAGAGACGGGTAAGAAGCTCAGCTCCTTCGCCTCCACTTTGATGACGGATCTTCAAGATAGAATCCTTTAAACACTGTATGCTCTGTATCTTAAGAAAAAAGCAAACTTGGAGTTTGTTATAGATACCAGCCTATTATGTTCCAAATGTAATAGGAGAGTTCAGTTTACAATTCTTTGAGAGACAAAATAAGATACTCTTAATTTCAGGCTTGTGACAGGCTGGTCTTGTTATTTTGTAGGACAGGTATTGT 1483 0.4214 MAFENFNDKNAVFRKLKAKAENKMCFDCNAKNPTWASVTYGIFLCIDCSSVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKEVAKSMAEEGGTQSSTVASQSAQAGDELPDVRTSEVPKENTLGKPEMPESTASPKASHSILSNTVKKTIGSKKSGKSGGLGARKLTTKPSESLYEQKPQEPPPAPVSSSTNNNLAAGPSFPSRFEYVENVQTSELNSGSAQVIGHVTPPKSSSFFAEFGMDSGFPKKSASNSSKVQIEETDEARKKFSNAKSISSAQFFGDQNKTADSDAKVTLSKFSGSTAISSADLFGHPSDNNIDLSASDMINRLSFQAQQDISSLKNIAGETGKKLSSFASTLMTDLQDRIL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01001 405 CDD ArfGap_ArfGap2_3_like 8 123 - -
Bach4g01001 405 MobiDBLite consensus disorder prediction 124 239 - -
Bach4g01001 405 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 5 405 - -
Bach4g01001 405 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Bach4g01001 405 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Bach4g01001 405 Gene3D Arf GTPase activating protein 2 142 IPR038508 -
Bach4g01001 405 MobiDBLite consensus disorder prediction 127 146 - -
Bach4g01001 405 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Bach4g01001 405 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Bach4g01001 405 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Bach4g01001 405 MobiDBLite consensus disorder prediction 171 190 - -
Bach4g01001 405 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Bach4g01001 405 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Bach4g01001 405 Pfam Putative GTPase activating protein for Arf 12 100 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01001 Bach-Chr4 6722970 6726918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01001 13 83 C2H2 Transcription Factor Family AT3G07940 51.389 9.30e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01001 K12493 K11855 gmx:100785169 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01001 4 6722970 6726918 Bach10g00815 10 5751551 5755500 BWGD
Bach4g01001 4 6722970 6726918 Bach4g01001 4 6722970 6726918 ECH