Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00996 ATGGCGAGTTTAGAATCAGCTCTCAGTGTCTTGGCATCGTATCGGTGTTCTACTAAATGCTTCTCATCTCCCAAACCATTAGACTCCATAAAGCTCCAACTTTCCAATTCTCATTTTACCCTTTCCTGCAATTCTATCTTCTCTTCAAAGATCTCTTCCATTAACTCCAGTAGAAGACTTTGTTTTGAATTATTATGCTCTGCGTTGCAAGAGTTAGCAGCAGAAGAAAATCCAGAGGAAACCCAAGTTAAAAGCGTCAAGAAGAAGCTTTACGTGTTTAATCTACCATGGTCCCTCACGGCGGTGGACATCAAGAACCTTTTTCGCGAGTGCGGAACTGTAAAAGATGTCCAGATAATAAAGAAGAAAGATGGGAGAAGAAGAGGCTTTGCCTTTGTTACTATGGCTTCATGGGATGAGGCTGAGGCTGGCATTGAGAAATTTAACTCTTATGAAGTATCAAGGAGGATAATAAGGGTAGAACATGCAAAGAGTGGACCTCCTTCTCAACATCCTCCAGATTTCCCTGCTGACGAGACACGCTATAGAATTTATGCATCCAATCTTGCACGGAAAGTAAGATCTACCCATCTCAGAGAATTCGTTGCTGAAAATTTCAAAACACCAGTTTCAGCTAGGGTTGTATTTGACGGCCCTAATGGAAGATCTACTGGATATGGATTTGTTTCTTTTGTTACAATGGACGAAGCAGAGGCAGCCATTTCTACTTTGAGTGGGAAGGAATTAATGGGGCGACCAATTATCCTTAAATTGAGCCAAAAAACTGTTGAAAGATCTGGAATTGAAAAAGAGGAAGAAGAGCAAGTTTATTATGGTCAAGTTGAAGGATTAATTCCTAGTAATTCGTGAAATAATCTTTTGACCATGGCAAGCTAAGAGAAAACCTGTAGAAGTTGAAATCTGATCTGAA 931 0.4017 MASLESALSVLASYRCSTKCFSSPKPLDSIKLQLSNSHFTLSCNSIFSSKISSINSSRRLCFELLCSALQELAAEENPEETQVKSVKKKLYVFNLPWSLTAVDIKNLFRECGTVKDVQIIKKKDGRRRGFAFVTMASWDEAEAGIEKFNSYEVSRRIIRVEHAKSGPPSQHPPDFPADETRYRIYASNLARKVRSTHLREFVAENFKTPVSARVVFDGPNGRSTGYGFVSFVTMDEAEAAISTLSGKELMGRPIILKLSQKTVERSGIEKEEEEQVYYGQVEGLIPSNS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00996 289 Gene3D - 67 169 IPR012677 -
Bach4g00996 289 SMART rrm1_1 89 161 IPR000504 GO:0003723
Bach4g00996 289 SMART rrm1_1 183 257 IPR000504 GO:0003723
Bach4g00996 289 Gene3D - 170 276 IPR012677 -
Bach4g00996 289 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 88 165 IPR000504 GO:0003723
Bach4g00996 289 SUPERFAMILY RNA-binding domain, RBD 168 265 IPR035979 GO:0003676
Bach4g00996 289 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 182 261 IPR000504 GO:0003723
Bach4g00996 289 CDD RRM_SF 90 161 - -
Bach4g00996 289 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 158 IPR000504 GO:0003723
Bach4g00996 289 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 184 254 IPR000504 GO:0003723
Bach4g00996 289 PANTHER OS02G0815200 PROTEIN 33 261 - -
Bach4g00996 289 SUPERFAMILY RNA-binding domain, RBD 83 171 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00996 Bach-Chr4 6674556 6676982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00996 84 280 Eukaryotic Initiation Factors Gene Family AT4G34110 27.638 2.38e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00996 - - qsa:O6P43_025150 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00996 4 6674556 6676982 Bach4g00996 4 6674556 6676982 ECH