Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00995 ATGGCATCTCTTGGGTACCCAAGAACTTGGGTTCCATATATGAACAGCAAAGATTGTTCTCAAGGTTTTTGCAGCTTGTACTGTCCACAGTGGTGCTATATAGTGTATCCTCCACCACCTCCCTCTGAATTTCCAGAAGAAGATTCACGCCCCAATTTCTCCCCTCTTGTTATTACAATCATTGGGATTCTGGCCAGTGCTTTTCTTCTGGTAAGTTACTATACTGTAATCTCCAAGTACTGTGCCAACAGAGAATCTGCACGCAGATATAACCATGACCCAAACGAAGAATTGGAAGACCATCACAACCCTTCTCTCCATGAGCCATGGCATGTCTCAACCACTGGCTTAGATGAGGCTCTGATCAAATCAATTACAGTCTGCAAGTACAAGAAAGGTGATGGCTTGCTTGGAGTAACAGATTGCTCTGTTTGTCTCAGTGAATTTCAAGAAGATGAAAGTGTGAGACTCTTGCCCAAATGCAGTCATGCTTTTCATCTTCCTTGCATTGACACATGGCTCAAATCTCACTCCAATTGCCCTCTCTGTCGTTCGAGTATTTTCACCTTCAACCCTTCAGCTCCTCAGGTGACTGTTCCAATTCTAGAAATTACTTCAAGGGGTGAAGCTTCAACAGAAATTCAGCATGCGAATGAAAGGGTAACTTCTGGGAGAGATAATGAAAGGAGTTCGGTGGAAGAAGAAATAATGCACAGTCGTGAAGCTCCAAAGCACGCATTGCGTGCCTATAGCGATTTAAGTAGTTTGCAGGGAAGGCATAGTATAATTGAGATTAGAGACGAAGGGTATGATTCCATTAGAAGATCAATCTCTATGGATCATTCATTTCAAAGTGGTCTTTCAGTTGCTGATGTTTTGCATGTGAATCAAGAACAAGATACATTAGCAGAAGAATGCTCTGCTGAAGCTGGTCCATCTAAGAGATCTCGTGGAGAAAGTAGCAAGTCTAGTTATAAAAGAAGGGTGTTACATTGCGTAATGAGTCCTGTTTCGATGAAGAGATCGTTTTCCAGTGGGAGATTCTCACTCACCAGGAATGCCAGAGGAAGACAGGGGATTATCCCTGTTTGA 1092 0.4286 MASLGYPRTWVPYMNSKDCSQGFCSLYCPQWCYIVYPPPPPSEFPEEDSRPNFSPLVITIIGILASAFLLVSYYTVISKYCANRESARRYNHDPNEELEDHHNPSLHEPWHVSTTGLDEALIKSITVCKYKKGDGLLGVTDCSVCLSEFQEDESVRLLPKCSHAFHLPCIDTWLKSHSNCPLCRSSIFTFNPSAPQVTVPILEITSRGEASTEIQHANERVTSGRDNERSSVEEEIMHSREAPKHALRAYSDLSSLQGRHSIIEIRDEGYDSIRRSISMDHSFQSGLSVADVLHVNQEQDTLAEECSAEAGPSKRSRGESSKSSYKRRVLHCVMSPVSMKRSFSSGRFSLTRNARGRQGIIPV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00995 363 SUPERFAMILY RING/U-box 141 190 - -
Bach4g00995 363 Pfam Ring finger domain 141 184 IPR001841 -
Bach4g00995 363 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Bach4g00995 363 PANTHER RING-H2 FINGER PROTEIN ATL16 40 327 IPR044600 GO:0016567|GO:0016740
Bach4g00995 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 190 IPR013083 -
Bach4g00995 363 FunFam RING-H2 finger protein ATL54 117 190 - -
Bach4g00995 363 CDD RING-H2_EL5-like 141 184 - -
Bach4g00995 363 MobiDBLite consensus disorder prediction 220 243 - -
Bach4g00995 363 MobiDBLite consensus disorder prediction 310 325 - -
Bach4g00995 363 SMART ring_2 142 183 IPR001841 -
Bach4g00995 363 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00995 Bach-Chr4 6670164 6671255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00995 7 363 C3H Transcription Factor Family AT5G17600 38.947 1.00e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00995 - - gmx:100792267 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00995 4 6670164 6671255 Bach10g00808 10 5686291 5687382 BWGD
Bach4g00995 4 6670164 6671255 Bach4g00995 4 6670164 6671255 ECH