Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00992 GTTTTCATTCTGCATCTTCGAGCTACGTTAACTTGTTTCAGCTAACTACCCACTTCTTCAAATCTTGAAATTTCGCAGCTTCGTTTCCCAGAATTCCAGCTTTTGATCATTTCAGTTTCTGGGTACCGTTAGGGTTTTGCTTTCTTTCTTTGCTTGACTACAAAAATCTTCATCTTTTCGGGCTGCTATCTGACTAATGGATTACGGTCGAGATGCGGGATATCCCGGTGAAAACGTTGTTCAAATAATCACCGGAGGAGGTGGACTGGATAGTTGGTCCGATGACCAGGCCATGTGGGCAACCGAGGACGATTACCGATTCTGGAATAACGGCGATGCTGACACTCCTTCCAACTCGAATTACGATCAAAGGTCATCCCAATCACGCTCTGGAAGCGAACCTCCTAATAAGAAATCGAGGAGTTCCCAGGATGTAACTTCGTCGAATCGGTCGAAAGCAATTGGGAAAATGTTCTTCAAGACAAAACTTTGTTGCAAATTCCGAGCTGGGACGTGCCCGTATATCACAAATTGCAATTTCGCTCACAGTCTTGAAGAGCTTCGTCGGCCACCACCGAATTGGCAAGAAATCGTGGCTGCACATGAGGAAGAAAAAGGCATAACGTCGGAGCCAAGGGAGGAATTTCAGATTCCTTCTGTCGGGTCGTCCGGTTTTACTGTGGAGACGCCAAGGTCGTATAAAGGTCGGCACTGTAAGAAGTTCTACACGGAAGAAGGGTGCCCATATGGAGACAATTGTACATTTCTTCACGACGAGCAATCCAAGAATCGAGAAAGTGTTGCAATAAGTTTAGGCCCTGGTGGGTATGGTGGAGCTGCCAATGGATCCAATTCCAAGCCATCAAATTGGAAAACAAGGATTTGCAATAAATGGGAGATGACAGGATATTGTCCATTTGGAAATAAATGCCATTTTGCTCATGGTGCTGCAGAATTGCACCGTTATGGAGGTGGGCTTGTGGAAGCAGAAACTAGAGACGCTGCTACTGCTGCTGCTCCTGACACAAAGCAGGGAGGAGTAGCTTCAAAAACTCCTGCAGATAATGTGGTTGCATCAGTCACTCCAGTTCCTCATTCCGATGTCTATCATATTGGAGTTCCATCTCAAAGGTCATCCATTGTGATACAGAGGCCAGGACAAAGAGCTCATCAGAAGTGGAAAGGTCCAGATAAAATCAGTAGGATATACGGTGATTGGATCGATGACATTGAATAGAAGTAGTAATTCCAGATTCCAAACAAGGAAAATGACTGATGAGGACTTGTTAGCCCCCCATGGACTAGGATTACCCAGAAACTGAATACCCAGTCTCCTTAGGATGTGATATGTTGTGTTTTTCTAACGGAAAAGAAAAAGAGCCGGGGGAGGAATCGCTTCAAGTTTACGTATGGATTTCCATTCTCATCTTTTTTACCTACTATATTATCTGATGATCCTTTTCTTTTTAACACTCGTGTTCTTTTTAGTTTGGTGGAGAATACATGTTCATATTCTACTGATGAATGTCGAAGCATAAGAGATTATATGATTTACATACTTCTCTCAATGTTAGAATTTGC 1581 0.4358 MDYGRDAGYPGENVVQIITGGGGLDSWSDDQAMWATEDDYRFWNNGDADTPSNSNYDQRSSQSRSGSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSLEELRRPPPNWQEIVAAHEEEKGITSEPREEFQIPSVGSSGFTVETPRSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGAANGSNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGAAELHRYGGGLVEAETRDAATAAAPDTKQGGVASKTPADNVVASVTPVPHSDVYHIGVPSQRSSIVIQRPGQRAHQKWKGPDKISRIYGDWIDDIE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00992 346 FunFam zinc finger CCCH domain-containing protein 15-like 218 257 - -
Bach4g00992 346 SUPERFAMILY CCCH zinc finger 222 255 IPR036855 GO:0046872
Bach4g00992 346 PANTHER CCCH ZINC FINGER/TIS11-RELATED 214 275 IPR045877 GO:0003729
Bach4g00992 346 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 94 118 IPR000571 GO:0046872
Bach4g00992 346 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 225 250 IPR000571 GO:0046872
Bach4g00992 346 SUPERFAMILY CCCH zinc finger 166 195 IPR036855 GO:0046872
Bach4g00992 346 MobiDBLite consensus disorder prediction 41 84 - -
Bach4g00992 346 SMART c3hfinal6 167 194 IPR000571 GO:0046872
Bach4g00992 346 SMART c3hfinal6 224 251 IPR000571 GO:0046872
Bach4g00992 346 SMART c3hfinal6 93 119 IPR000571 GO:0046872
Bach4g00992 346 Pfam CCCH-type zinc finger 171 193 IPR041367 -
Bach4g00992 346 ProSiteProfiles Zinc finger C3H1-type profile. 167 195 IPR000571 GO:0046872
Bach4g00992 346 Gene3D - 161 198 - -
Bach4g00992 346 Gene3D - 88 124 - -
Bach4g00992 346 Gene3D - 218 256 - -
Bach4g00992 346 ProSiteProfiles Zinc finger C3H1-type profile. 224 252 IPR000571 GO:0046872
Bach4g00992 346 MobiDBLite consensus disorder prediction 46 84 - -
Bach4g00992 346 FunFam Zinc finger, CCCH-type 161 199 - -
Bach4g00992 346 SUPERFAMILY CCCH zinc finger 91 124 IPR036855 GO:0046872
Bach4g00992 346 ProSiteProfiles Zinc finger C3H1-type profile. 93 120 IPR000571 GO:0046872
Bach4g00992 346 FunFam Zinc finger CCCH domain-containing protein 89 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00992 Bach-Chr4 6653225 6656359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00992 226 254 C3H Transcription Factor Family AT1G68200 62.069 2.72e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach4g00992 zf-CCCH 1.1e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00992 - - pcin:129284509 632.484