Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00981 TTTTTCTATTGTTTCCTTCTTTTTAAAAAAATTGAATTTCTGACATGGACGGAGTTAGTAACAGTGGCGAAGATGGCAGCGCTAGTCAAACGCCTGCACCTGCGCCCATGCCTAATTCCAACGCACCGCCGCCATTTCTTAGTAAGACATACGATATGGTGGATGATCCTTCTACCGATTCGATTGTGTCGTGGAGCTCAACTAACAATAGCTTCGTGGTTTGGAACCCACCTGAGTTTGCCAGAGACCTGTTGCCCAAGTACTTCAAGCACAATAACTTCTCCAGTTTTGTGAGGCAATTGAATACATATGGTTTCAGGAAAGTTGATCCGGACCGCTGGGAATTTGCAAATGAGGGATTTTTGAGGGGTCAGAAGCACTTGCTTGGGAGTATAACACGGCGAAAACGTGCCCATGGTCATAGTCATCAACAGATACAACAATCGCATGGACAGAATTCATCAGTGGGAGCGTGTGTAGAAGTTGGGAAGTTTGGGCTTGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGTCTACTGATAACCAGCTGCAGGCAATGGCTCAGCGCCTTCAAGGAATGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAGGCTGTCCAGAGCCCTGGCTTCTTCACTCAGTTTGTACAACAGCAAAATGAGAGCAATAGGCGCATAACTGAGGCCAACAAAAAGCGGCGGCTGAAGCAGGAAGATATTGAAACAGATAATACTGCCCCTCCTGATGGACAAATTATTAAGTATCAACCTCTGATGAATGAAGCAGCAAAAGCAATGCTAAGACAGATCATGAAATTGGATTCTTCTCGGATGGAATCTTTGAGTAATAATCCTGACAGTTACTTGATTGGTGATGGTTCATCATCATCCACTGTAATGGACAGTGCCTCTTCTTCCCGAACTTCTGGAGTGAGACTTCAAGAGGTCCCACCAACTTCAGTGCAGTCATCTCACATTCCTGCCGCATTTGGGACTTCAGGGCATGGCCTCTCATTGGGAAAATCTGAAATACAATCTAATCCACAAGCTGCTGCTGAAAAAGTAACAGCTGGCAAATATGAGGATGTAAATGTGCTGGTTGGAGCAACAGAGGCACATTCAATTCCTGTTCCTCAGGAAGATGTCCTCATGTCCGAGCTTTCTTCTATACCGGAGATAGTGCCAGAAAGCATTCTTGATATTGCTGGAGAAGATTATATAGGACCTGACACAGGCAGTGAAGGATTTGTTGATCCTACTTCATTGGGAGTGAATGGGTCATTGCCCCTTGATCTTGATAGCATTTCACCTGATCCAGACATTGATGACTTATTACTCAATCCTTCCTTTTGGGATGATGTTCTTGTGCAAAGTCCATTGCCGGACATTGAACCCAATTCTAACGAAGTGTCCAAGGGGACTGAAGCACAGCCTATGGAAAATGGATGGAACAAAACTCAACGTATGGATCAGCTAACAGAACAGATGGGTCTTCTCTCTTCTGATACAAAAGGAATTCAAAAAGCTTTGTGA 1586 0.4451 MDGVSNSGEDGSASQTPAPAPMPNSNAPPPFLSKTYDMVDDPSTDSIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLGSITRRKRAHGHSHQQIQQSHGQNSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQAMAQRLQGMEQRQQQMMSFLAKAVQSPGFFTQFVQQQNESNRRITEANKKRRLKQEDIETDNTAPPDGQIIKYQPLMNEAAKAMLRQIMKLDSSRMESLSNNPDSYLIGDGSSSSTVMDSASSSRTSGVRLQEVPPTSVQSSHIPAAFGTSGHGLSLGKSEIQSNPQAAAEKVTAGKYEDVNVLVGATEAHSIPVPQEDVLMSELSSIPEIVPESILDIAGEDYIGPDTGSEGFVDPTSLGVNGSLPLDLDSISPDPDIDDLLLNPSFWDDVLVQSPLPDIEPNSNEVSKGTEAQPMENGWNKTQRMDQLTEQMGLLSSDTKGIQKAL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00981 513 MobiDBLite consensus disorder prediction 1 20 - -
Bach4g00981 513 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 312 IPR027725 -
Bach4g00981 513 SMART hsfneu3 27 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00981 513 MobiDBLite consensus disorder prediction 228 246 - -
Bach4g00981 513 SUPERFAMILY "Winged helix" DNA-binding domain 27 120 IPR036390 -
Bach4g00981 513 Coils Coil 149 197 - -
Bach4g00981 513 MobiDBLite consensus disorder prediction 464 492 - -
Bach4g00981 513 MobiDBLite consensus disorder prediction 287 315 - -
Bach4g00981 513 Gene3D - 23 121 IPR036388 -
Bach4g00981 513 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00981 513 PRINTS Heat shock factor (HSF) domain signature 31 54 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00981 513 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00981 513 MobiDBLite consensus disorder prediction 1 38 - -
Bach4g00981 513 Pfam HSF-type DNA-binding 31 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00981 513 FunFam Heat shock transcription factor 1 24 121 - -
Bach4g00981 513 ProSitePatterns HSF-type DNA-binding domain signature. 70 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00981 513 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00981 Bach-Chr4 6593126 6596442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00981 2 506 HSF AT1G32330 55.058 2.40e-169 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach4g00981 HSF_DNA-bind 9.4e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00981 K09419 - gmx:732544 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00981 4 6593126 6596442 Bach4g00981 4 6593126 6596442 ECH