Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00980 ATGACACCGGTGAGAGAAAGGAGAAAACAGCAAGGTCTAAGTCTAAGGCTTTCCTTGCCAGTAGCACCACGTCCAATTCCACCCGCAGCATTGTCATCATTGTCAGCTTCCTATGTAGATTTCCTAAGCATCAAGGACCTCTCAGACCTTCAGAAACTGGCAGTTGTTGGCCATGGCAGTGGTGGCACAGTTTATAAAGTCCATCACAGAAAGAACCATTCCTTTTATGCCTTGAAAGTCATCATTGGCATTCGTCAACAGCCCACACTTGAGGCTGAGATTCTAAAACGAGTGGATTCTCCATATATCGTAAGATGCCATGCAGTTTTCGACAATGGCTGCTGTCGAGGTGATAATGAAAATGGAACTGATTTAAGCTTTGTTATGGAATACATGGAAGGAGGGTCATTACATGATGTGCTACGAGCACACCATAGACTACCAGAGGAGGTGATCTCTTGCTTGGCTAGGCGTGTCTTGGAAGGACTTAACTATTTACATGGCTTGCACATTGTTCATAGAGATATTAAACCCTCGAATTTGCTAGTGAATGACAAGGGGGAGGTGAAGATTGCAGATTTTGGAATCAGTCTAGTGAAGGGCAAATTTGAGGTATCTGACTTGGAGTTGGACACGGGCACATGTGCCTACATGAGCCCAGAAAGAGTTGATCCTGAGAGATGGAATGGTGAAAATGCAGATGGGTTTGCAGCAGATGTCTGGTCAGTGGGAGTGGTCATGTTAGAATGCCTTCTTGGTCATTTTCCCTTGATTAGTCCAGGCCAGAAACCAGACTGGGCTACGTTAATTTGTGCAATTTGCTTCCGTGAAAGCCTGGAGATGCCGGAAAATGCATCGCCGGAGTTTCAAAGTTTTATCCGGAGGTGTCTAGAGAAGGACTGGAACAAGAGAGCAACAGTGATTCAACTTCTTGACCACCCATTTGTGAATAGAAATAGTTGCGGTTCTAACAGAGAGATGGTCGATTACGTTCTGCCTCGTTGA 1005 0.4517 MTPVRERRKQQGLSLRLSLPVAPRPIPPAALSSLSASYVDFLSIKDLSDLQKLAVVGHGSGGTVYKVHHRKNHSFYALKVIIGIRQQPTLEAEILKRVDSPYIVRCHAVFDNGCCRGDNENGTDLSFVMEYMEGGSLHDVLRAHHRLPEEVISCLARRVLEGLNYLHGLHIVHRDIKPSNLLVNDKGEVKIADFGISLVKGKFEVSDLELDTGTCAYMSPERVDPERWNGENADGFAADVWSVGVVMLECLLGHFPLISPGQKPDWATLICAICFRESLEMPENASPEFQSFIRRCLEKDWNKRATVIQLLDHPFVNRNSCGSNREMVDYVLPR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00980 334 CDD PKc_MAPKK_plant_like 48 317 - -
Bach4g00980 334 Gene3D Transferase(Phosphotransferase) domain 1 45 330 - -
Bach4g00980 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bach4g00980 334 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 46 319 - -
Bach4g00980 334 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Bach4g00980 334 SMART serkin_6 50 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00980 334 SUPERFAMILY Protein kinase-like (PK-like) 48 318 IPR011009 -
Bach4g00980 334 Pfam Protein kinase domain 51 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00980 334 ProSiteProfiles Protein kinase domain profile. 50 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00980 Bach-Chr4 6590052 6591056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00980 1 317 MAP Kinase Kinase Gene Family AT1G32320 51.258 6.69e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bach4g00980 Pkinase 4.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00980 K20604 - gmx:100817973 448.358