Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00970 ATGCCTGCTGATCTGTTGGCCAAATACTGGAACATCTACCAGGTGGAAGGAAGGGTTTCTCTATCTAAGGAAGCTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGAACAAAAGCTGTTAGTGCCACTGAAACTGTGAAAGTTGCTAACATGATGGCCAGAAGTGGAGGAGATGCACTAAGGGCTTCGTCATCATGTGGTGTGAGATTGCATGGTAATGCGGATGTTTTTTTCAAGCGGAAGGTGGATAAGTTTGACACGAGTGATCTAGATTGGACTGAAAATATTCCAGAGTGTCCTGTGTATTCTCCAACAAAGGAGGAATTCAATGATCCTTTGGTATATTTGCAGAAGATAGCTCCAGAAGCTTCAAAATATGGTATATGCAAGATAGTTTCTCCTCTGAGTGCTTCTGTTCCTGCTGGGGTCGTTTTAATGAAGGAGAAAGTAGGATTCAAGTTTACAACTAGGGTACAGCCACTTCGCCTTGCTGAGTGGGATGCTGAAGACAAAGTCACGTTTTTCATGAGTGGAAGAAATTATTCATTTCGTGATTTTGAAAAAATGGCGAACAAGGTTTTTGCACGTAGATATTGCAGTGCTGGTTGTCTTCCTGCCTCATACTTGGAAAAAGAGTTTTGGCATGAAATTGGTTGTGGAAAGATGGAAACGGTTGAATATGCATGTGATGTTGATGGTAGTGCGTTTTCAAGTTCTCCCACTGATCAGCTTGGAAACAGTAAATGGAATTTGAAGAAACTGTCACGGTTGCCCAAGTCTGTTCTGCGTCTCTTGGAAACGTCAATTCCGGGAGTAACGGAACCCATGCTGTACATTGGAATGCTTTTTAGTATGTTTGCTTGGCACGTGGAGGATCATTATTTGTACAGGCACGTTATTAATTATCATCATTGTGGGGCATCAAAAACTTGGTACGGCATTCCAGGTCATGCAGCTTTGGATTTTGAAAGGGTGGCTAGAGAACATGTATATACTCATGATATTTTGTCCACTGAGGGAGAAGATGGAGCCTTTGATATTCTTCTGGGGAAAACAACTCTGTTTCCTCCAAATATTTTGTTAGAACATGAAGTTCCGGTCTACAAGGCTGTCCAAAAGCCAGGGGAGTTTGTTGTTACCTTCCCAAGAGCTTATCATGCCGGATTCAGTCATGGTTTTAACTGTGGTGAAGCGGTCAACTTTGCCATGGGCAATTGGTTTCCTTTAGGGGCTATTTCTAGCCGGCGGTACGCACTTCTTAATAGGGTGCCTTTGTTGCCTCATGAAGAACTTTTGTGCAAAGAAGCAATGCTTCTCTATTCGAGCTCAGAACTTGAAGATGCAGATTTTTCCTCGGCGGACTTGTCATCTCACAATTGCATTAAGATTGCTTTTGTTAATTTGATGCGCTTTCAGCATTGTGCTCGATGGTTCCTTATGAAATCACGGGCATGTACAAATGTTTCTACGTATTCTCACGGCACTATTCTCTGTAGCCTCTGCAAACGTGATTGTTATGTAGCTTATATTGATTGCGATTGTCACATGCATCCAGTGTGCCTTCGTCATGATATTGAATCTCTCGCCTTCACCTGTGGAAGCAAATTTGCTCTTTATCTGAGGGAGGATATTACTGATATGGAAGCTGCAGCCAAGGAGTTTGAGCGGGAAGATGGAATACTGGATGAGATTCCTAAGCAAATCAGGGGTGACAAAAACATGTACACATATCCTTTGTCAAATATGTTTCAGAGAGCTGAAGCAAATGGGTATACCCCTTATTGCGAGATAAAATGGGATACTGTCATGGAATTTCATTCAACCCCAGATCAGTCAACAAATAATCAAGAGCATCTTCCACAAAGTCAATTTATTTCGAAACATTGCTCAGAAGACCTTAAACCACAAGTGTCTGAAGTTCCTTTTTCTACTGCTGCATCGACTCTTTGTTCTCTTTCAGAACCTCTTGATATCTCATCTGCTCCCAAAAATGAGGAGCATGCTAACTTTGATTTAGGCATTATTGATTCTGAAGTGTTTTGTGGAAGAGTATCCAATAGTACCTGTGAATCTTCAGTACAGTGCCATGAAATTTCAAGTAAACCTAAAGGCGATCTCCATAGATTAGACATGAAGCCTGTCGTAGATTATCAGAGTGATGATTCTGACGCAGAAATATTCAGGGCAAAGCGTCCTTCTTCTCTGAAGGCCCAGAAAAGAAATATGAAGGATGCCATGTCTGTAAAGCATCCTGACCATCAGGGACTGAAACGATTGAAGAAAGACATTCGTGAAGCAAGAAGTGTGCAACAAATAGATTGCAAAAAAAGTAATGAAACAAGCAGCAAATTTAGTCACCCTACTAATCATAAAGGTGATGGGGAAAGTTCCTTGAAGGACAGGTTTTCAAGGGGAAATAGTATTCCCATTTTTATCAGGTATAAGAAGTCAGGCAATGAGGAAGTAAGTAGACAAGGAGATCCCCACAGGAAAGATAGATTGCAGCATATTAGGGATCCACCTCCCATAGACTTTGGGCCGAAGCGCCTTAAACTCCGAGGCCCTTCATTTATGGGCTTTGAGAACAGATGGAGTTGA 2607 0.4173 MPADLLAKYWNIYQVEGRVSLSKEARNGLEFLKRKRLQRTKAVSATETVKVANMMARSGGDALRASSSCGVRLHGNADVFFKRKVDKFDTSDLDWTENIPECPVYSPTKEEFNDPLVYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKVGFKFTTRVQPLRLAEWDAEDKVTFFMSGRNYSFRDFEKMANKVFARRYCSAGCLPASYLEKEFWHEIGCGKMETVEYACDVDGSAFSSSPTDQLGNSKWNLKKLSRLPKSVLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYRHVINYHHCGASKTWYGIPGHAALDFERVAREHVYTHDILSTEGEDGAFDILLGKTTLFPPNILLEHEVPVYKAVQKPGEFVVTFPRAYHAGFSHGFNCGEAVNFAMGNWFPLGAISSRRYALLNRVPLLPHEELLCKEAMLLYSSSELEDADFSSADLSSHNCIKIAFVNLMRFQHCARWFLMKSRACTNVSTYSHGTILCSLCKRDCYVAYIDCDCHMHPVCLRHDIESLAFTCGSKFALYLREDITDMEAAAKEFEREDGILDEIPKQIRGDKNMYTYPLSNMFQRAEANGYTPYCEIKWDTVMEFHSTPDQSTNNQEHLPQSQFISKHCSEDLKPQVSEVPFSTAASTLCSLSEPLDISSAPKNEEHANFDLGIIDSEVFCGRVSNSTCESSVQCHEISSKPKGDLHRLDMKPVVDYQSDDSDAEIFRAKRPSSLKAQKRNMKDAMSVKHPDHQGLKRLKKDIREARSVQQIDCKKSNETSSKFSHPTNHKGDGESSLKDRFSRGNSIPIFIRYKKSGNEEVSRQGDPHRKDRLQHIRDPPPIDFGPKRLKLRGPSFMGFENRWS 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00970 868 ProSiteProfiles JmjC domain profile. 249 421 IPR003347 -
Bach4g00970 868 FunFam Lysine-specific demethylase isoform A 97 448 - -
Bach4g00970 868 MobiDBLite consensus disorder prediction 789 803 - -
Bach4g00970 868 ProSiteProfiles JmjN domain profile. 102 143 IPR003349 -
Bach4g00970 868 Pfam JmjC domain, hydroxylase 279 404 IPR003347 -
Bach4g00970 868 PANTHER LYSINE-SPECIFIC DEMETHYLASE 95 794 - -
Bach4g00970 868 SMART cupin_9 246 421 IPR003347 -
Bach4g00970 868 MobiDBLite consensus disorder prediction 820 849 - -
Bach4g00970 868 SMART JmjN_1 101 142 IPR003349 -
Bach4g00970 868 Gene3D Cupin 102 464 - -
Bach4g00970 868 MobiDBLite consensus disorder prediction 745 775 - -
Bach4g00970 868 MobiDBLite consensus disorder prediction 819 855 - -
Bach4g00970 868 MobiDBLite consensus disorder prediction 732 805 - -
Bach4g00970 868 SUPERFAMILY Clavaminate synthase-like 180 437 - -
Bach4g00970 868 Pfam C5HC2 zinc finger 501 552 IPR004198 -
Bach4g00970 868 Pfam jmjN domain 103 135 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00970 Bach-Chr4 6535780 6540454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00970 99 439 JUMONJI Transcription Factor Family AT1G30810 34.988 3.43e-58 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach4g00970 JmjC 8.5e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00970 - - gmx:100798611 1365.9