Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach4g00947 | ATGGCTAGGAAACACGAAACCGCCATTGTCAGCGAATCAGTAGCCGAACAAGTTCCCAACGGAATTAAATCAGAAAAGAAGAAAAAGAAGAAGAAAGACAAGCAAAACGAAGCTAATCCCAAAAGGAAGGTCGAGGAAGTTGAGATTCACGATGATACAGAATCGAACAAGAAGAGTAAAAAGCACAAAAAATCGAAAGAGAACACGGAGGAAAACGGAACCGTCGAAGGAAATGACGGCAACAAAGCCATAGATGGTGATGAATCGGTGAGAGATGGGTCTGTTGTGGCTACGGGGAAGAATGTCAAAGACCCAAAATACGAGCCATTGAAAACATTTTCTGCTTCAGGGCTTCCAGAGAATGTCTTAGAGTGCTGCAAGAATTTTGAAAAGCCATCCCCTATTCAGTCCTGGGCATGGCCTTTCTTATTGGATGGTCGTGATTTAATTGGAATTGCTGCAACTGGGTCAGGCAAGACATTGGCTTTTGGTATACCGGCTATTGTCCATGTTCAGAGCAAGCGCAAAGGTAAAGCGTCAAAAGGACGGAATCCTCTTTGCCTTGTACTCTCTCCCACCAGGGAACTAGCTCAACAAATTTCGGATGTTATGTGCGATGCTGGGAGCTCTTGTGGGGTGGAGTCAATTTGTTTGTATGGTGGAACCTCCAAAGGGCCACAAATATCTTCATTAAAATCTGGCATTGACATTGTCATTGGAACACCAGGTCGTATAAAGGATCTGATAGAAATGGGTGTTTGTTGCCTCAAAGAAGTATCGTTTGTGGTTCTTGATGAAGCGGATCGAATGCTTGACATGGGATTTGAACAAGCTGTTCGCTCTATACTGAGCCAGACATGTTCTGTTCGTCAAATGGTTATGTTCAGTGCTACATGGCCTCTACCAGTTCATCAATTAGCTCAGGAGTTTATGGACCCTAACCCTGTGAAAGTTGTTGTAGGGTCAGAGGATTTAGCTGCCAATCATGATGTAATGCAGATAGTTGAGGTGTTAGAGGAGCATTCACGTGATAAGCGCCTGGCTGCTTTGCTTGAAAAGTATCACGAATCTCAAAGGAATCGAGTATTGGTTTTTGTCTTGTACAAATGGGAAGCCACGCGAGTTGAAAATATGCTTCGAGAAGGAGGCTGGAAGGTTGTCTCCATTCATGGGGATAAAGCACAAACTGAACGTACAAAGGCACTGTCATTATTCAAGAAGGGAAGCTGTCCTTTGATGATTGCTACCGATGTGGCTGCTCGTGGATTGGATATTCCGGATGTTGAAGTAGTGATCAACTATAGTTTTCCACTTACTACTGAAGATTATGTTCATAGAATAGGACGGACTGGACGAGCTGGTAAGAAAGGTGTTGCTCATACATTCTTCACAAAGCATAACAAGGGACTTGCTGGGGAGCTGGTGAATGTTTTAAAAGAGGCAGGACAAATTGTGCCTGATGCCCTTCTGAAATTTGGCACGCATGTGAAGAAAAAGGAGTCCAAGCTTTATGGTGCTCACTTCAAGGAAATTCCTGTTGATGCTCCAAAATCTCAAAAAATCACATTTGACAACTCAGATGATGAAGATTAAATGCAGGTTATTTTTGTTTAGTTTGTTAGGGGAATAGTTCATTATGTATTTTTTTTTTTTGGTATTGTCATTATGTATTCTTTTAAAACACAAGAGGAAAGAATTATTATTATATTAGAAAGCATTTCTTGTTGTAAGCATGTACTGGTCAGTAATTGGAGGGTTAAAT | 1762 | 0.4171 | MARKHETAIVSESVAEQVPNGIKSEKKKKKKKDKQNEANPKRKVEEVEIHDDTESNKKSKKHKKSKENTEENGTVEGNDGNKAIDGDESVRDGSVVATGKNVKDPKYEPLKTFSASGLPENVLECCKNFEKPSPIQSWAWPFLLDGRDLIGIAATGSGKTLAFGIPAIVHVQSKRKGKASKGRNPLCLVLSPTRELAQQISDVMCDAGSSCGVESICLYGGTSKGPQISSLKSGIDIVIGTPGRIKDLIEMGVCCLKEVSFVVLDEADRMLDMGFEQAVRSILSQTCSVRQMVMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLEEHSRDKRLAALLEKYHESQRNRVLVFVLYKWEATRVENMLREGGWKVVSIHGDKAQTERTKALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTKHNKGLAGELVNVLKEAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKITFDNSDDED | 530 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach4g00947 | 530 | Gene3D | - | 323 | 496 | IPR027417 | - | |
Bach4g00947 | 530 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 346 | 493 | IPR001650 | - | |
Bach4g00947 | 530 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 55 | 489 | - | - | |
Bach4g00947 | 530 | MobiDBLite | consensus disorder prediction | 37 | 73 | - | - | |
Bach4g00947 | 530 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 111 | 137 | IPR014014 | GO:0003724 | |
Bach4g00947 | 530 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 263 | 271 | IPR000629 | - | |
Bach4g00947 | 530 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 140 | 317 | IPR014001 | - | |
Bach4g00947 | 530 | SMART | ultradead3 | 128 | 334 | IPR014001 | - | |
Bach4g00947 | 530 | Pfam | DEAD/DEAH box helicase | 134 | 303 | IPR011545 | GO:0003676|GO:0005524 | |
Bach4g00947 | 530 | CDD | DEADc | 127 | 318 | - | - | |
Bach4g00947 | 530 | MobiDBLite | consensus disorder prediction | 1 | 100 | - | - | |
Bach4g00947 | 530 | Pfam | Helicase conserved C-terminal domain | 346 | 454 | IPR001650 | - | |
Bach4g00947 | 530 | Gene3D | - | 88 | 322 | IPR027417 | - | |
Bach4g00947 | 530 | FunFam | ATP-dependent RNA helicase RhlB | 320 | 497 | - | - | |
Bach4g00947 | 530 | CDD | SF2_C_DEAD | 331 | 463 | - | - | |
Bach4g00947 | 530 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 467 | IPR027417 | - | |
Bach4g00947 | 530 | SMART | helicmild6 | 373 | 454 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach4g00947 | Bach-Chr4 | 6344799 | 6349033 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach4g00947 | 108 | 462 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 33.983 | 1.20e-57 | 196 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach4g00947 | K14811 | - | qsa:O6P43_025094 | 832.402 |