Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00947 ATGGCTAGGAAACACGAAACCGCCATTGTCAGCGAATCAGTAGCCGAACAAGTTCCCAACGGAATTAAATCAGAAAAGAAGAAAAAGAAGAAGAAAGACAAGCAAAACGAAGCTAATCCCAAAAGGAAGGTCGAGGAAGTTGAGATTCACGATGATACAGAATCGAACAAGAAGAGTAAAAAGCACAAAAAATCGAAAGAGAACACGGAGGAAAACGGAACCGTCGAAGGAAATGACGGCAACAAAGCCATAGATGGTGATGAATCGGTGAGAGATGGGTCTGTTGTGGCTACGGGGAAGAATGTCAAAGACCCAAAATACGAGCCATTGAAAACATTTTCTGCTTCAGGGCTTCCAGAGAATGTCTTAGAGTGCTGCAAGAATTTTGAAAAGCCATCCCCTATTCAGTCCTGGGCATGGCCTTTCTTATTGGATGGTCGTGATTTAATTGGAATTGCTGCAACTGGGTCAGGCAAGACATTGGCTTTTGGTATACCGGCTATTGTCCATGTTCAGAGCAAGCGCAAAGGTAAAGCGTCAAAAGGACGGAATCCTCTTTGCCTTGTACTCTCTCCCACCAGGGAACTAGCTCAACAAATTTCGGATGTTATGTGCGATGCTGGGAGCTCTTGTGGGGTGGAGTCAATTTGTTTGTATGGTGGAACCTCCAAAGGGCCACAAATATCTTCATTAAAATCTGGCATTGACATTGTCATTGGAACACCAGGTCGTATAAAGGATCTGATAGAAATGGGTGTTTGTTGCCTCAAAGAAGTATCGTTTGTGGTTCTTGATGAAGCGGATCGAATGCTTGACATGGGATTTGAACAAGCTGTTCGCTCTATACTGAGCCAGACATGTTCTGTTCGTCAAATGGTTATGTTCAGTGCTACATGGCCTCTACCAGTTCATCAATTAGCTCAGGAGTTTATGGACCCTAACCCTGTGAAAGTTGTTGTAGGGTCAGAGGATTTAGCTGCCAATCATGATGTAATGCAGATAGTTGAGGTGTTAGAGGAGCATTCACGTGATAAGCGCCTGGCTGCTTTGCTTGAAAAGTATCACGAATCTCAAAGGAATCGAGTATTGGTTTTTGTCTTGTACAAATGGGAAGCCACGCGAGTTGAAAATATGCTTCGAGAAGGAGGCTGGAAGGTTGTCTCCATTCATGGGGATAAAGCACAAACTGAACGTACAAAGGCACTGTCATTATTCAAGAAGGGAAGCTGTCCTTTGATGATTGCTACCGATGTGGCTGCTCGTGGATTGGATATTCCGGATGTTGAAGTAGTGATCAACTATAGTTTTCCACTTACTACTGAAGATTATGTTCATAGAATAGGACGGACTGGACGAGCTGGTAAGAAAGGTGTTGCTCATACATTCTTCACAAAGCATAACAAGGGACTTGCTGGGGAGCTGGTGAATGTTTTAAAAGAGGCAGGACAAATTGTGCCTGATGCCCTTCTGAAATTTGGCACGCATGTGAAGAAAAAGGAGTCCAAGCTTTATGGTGCTCACTTCAAGGAAATTCCTGTTGATGCTCCAAAATCTCAAAAAATCACATTTGACAACTCAGATGATGAAGATTAAATGCAGGTTATTTTTGTTTAGTTTGTTAGGGGAATAGTTCATTATGTATTTTTTTTTTTTGGTATTGTCATTATGTATTCTTTTAAAACACAAGAGGAAAGAATTATTATTATATTAGAAAGCATTTCTTGTTGTAAGCATGTACTGGTCAGTAATTGGAGGGTTAAAT 1762 0.4171 MARKHETAIVSESVAEQVPNGIKSEKKKKKKKDKQNEANPKRKVEEVEIHDDTESNKKSKKHKKSKENTEENGTVEGNDGNKAIDGDESVRDGSVVATGKNVKDPKYEPLKTFSASGLPENVLECCKNFEKPSPIQSWAWPFLLDGRDLIGIAATGSGKTLAFGIPAIVHVQSKRKGKASKGRNPLCLVLSPTRELAQQISDVMCDAGSSCGVESICLYGGTSKGPQISSLKSGIDIVIGTPGRIKDLIEMGVCCLKEVSFVVLDEADRMLDMGFEQAVRSILSQTCSVRQMVMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLEEHSRDKRLAALLEKYHESQRNRVLVFVLYKWEATRVENMLREGGWKVVSIHGDKAQTERTKALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTKHNKGLAGELVNVLKEAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKITFDNSDDED 530
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00947 530 Gene3D - 323 496 IPR027417 -
Bach4g00947 530 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 346 493 IPR001650 -
Bach4g00947 530 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 55 489 - -
Bach4g00947 530 MobiDBLite consensus disorder prediction 37 73 - -
Bach4g00947 530 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 111 137 IPR014014 GO:0003724
Bach4g00947 530 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 263 271 IPR000629 -
Bach4g00947 530 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 140 317 IPR014001 -
Bach4g00947 530 SMART ultradead3 128 334 IPR014001 -
Bach4g00947 530 Pfam DEAD/DEAH box helicase 134 303 IPR011545 GO:0003676|GO:0005524
Bach4g00947 530 CDD DEADc 127 318 - -
Bach4g00947 530 MobiDBLite consensus disorder prediction 1 100 - -
Bach4g00947 530 Pfam Helicase conserved C-terminal domain 346 454 IPR001650 -
Bach4g00947 530 Gene3D - 88 322 IPR027417 -
Bach4g00947 530 FunFam ATP-dependent RNA helicase RhlB 320 497 - -
Bach4g00947 530 CDD SF2_C_DEAD 331 463 - -
Bach4g00947 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 467 IPR027417 -
Bach4g00947 530 SMART helicmild6 373 454 IPR001650 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bach4g00947 Bach-Chr4 6344799 6349033 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00947 108 462 Eukaryotic Initiation Factors Gene Family AT3G19760 33.983 1.20e-57 196
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00947 K14811 - qsa:O6P43_025094 832.402