Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00944 ATGGCTGTTTGCACAGTCTACACAACACAAACACTCAACACCAACTGCCCCATCTCAACTCCATCAAAAACACATTTGAGTTTCCATCAAAGACAGCTAGTTTTCTACACTACAAGCAAGAGAAGCAGCAAGAGAGGCAACAATTACAGCAGCAGCCCATGTGTGATAACATGTGCAGCAGGTGACTCACAGACAGTGGTGATTGGTCTAGCAGCAGACTCAGGGTGTGGGAAGAGCACCTTCATGAGAAGGCTCACTAGTGTGTTTGGAGGTAGAGCAGAACCACCCAAGGGTGGCAACCCAGATTCCAACACTCTGATAAGTGACACCACCACAGTGATATGCTTGGATGATTACCATTCATTGGATAGAACAGGTAGAAAAGAGAAGGGTGTCACTGCACTTGACCCAAGAGCCAACAATTTTGATCTCATGTATGAGCAAGTTAAGGCTATTAAACAAGGAATTGCTGTGGAGAAGCCCATTTACAACCACGTCACTGGACTCTTGGATCCACCGGAGCTGATTAAACCACCCAAAATTTTAGTCATTGAAGGTTTGCATCCAATGTTTGATCCTCGTGTAAGAGATCTTTTAGACTTCAGCATTTACCTAGACATCAGCAATGAGGTCAAATTTGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGGCACAGCCTTGAAAGCATTAAAGCTAGCATTGAAGCTAGGAAGCCTGATTTTGATGCTTATATTGATCCCCAGAAGCAGTATGCAGATGCAGTTATAGAAGTGTTGCCAACCCAACTCATTCCAGACGATAATGGGGGAAAGATTTTGAGAGTGAGGTTGATACAGAAAGAAGGGGTTAAGTATTTTAGCCCTGTTTACTTGTTTGATGAAGGCTCCACCATTTCTTGGATACCATGTGGGAGGAAGCTCACCTGCTCTTATCCTGGCATCAAATTTTTCTATGGACCAGAGAGTTACTATGGTCATGAGGTGTCTGTTGTGGAAATGGATGGGCAATTTGACAGATTAGATGAGCTAATATACGTAGAGAGTCATTTAAGCAACCTCTCATCCAAGTTCTATGGAGAAGTTACTCAACAGATGTTGAAGCACTCTGACTTCCCAGGCAGCAACAACGGGACAGGTCTCTTCCAAACCATAACTGGTTTGAAGATAAGAGATTTATTTGAACAGATTATAGCCAGCAAGAGTGGAACTCCAGTAGGAGCAGCAAAAGCTTAA 1236 0.4353 MAVCTVYTTQTLNTNCPISTPSKTHLSFHQRQLVFYTTSKRSSKRGNNYSSSPCVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGRAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAIKQGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNGGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPESYYGHEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHSDFPGSNNGTGLFQTITGLKIRDLFEQIIASKSGTPVGAAKA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00944 411 Pfam Phosphoribulokinase / Uridine kinase family 67 265 IPR006083 GO:0005524|GO:0016301
Bach4g00944 411 FunFam Phosphoribulokinase 62 292 - -
Bach4g00944 411 ProSitePatterns Phosphoribulokinase signature. 216 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bach4g00944 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 336 IPR027417 -
Bach4g00944 411 CDD PRK 67 355 - -
Bach4g00944 411 PRINTS Phosphoribulokinase family signature 72 89 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bach4g00944 411 PRINTS Phosphoribulokinase family signature 234 257 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bach4g00944 411 PRINTS Phosphoribulokinase family signature 181 199 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bach4g00944 411 PRINTS Phosphoribulokinase family signature 216 233 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bach4g00944 411 Gene3D - 62 288 IPR027417 -
Bach4g00944 411 PANTHER URIDINE KINASE 59 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00944 Bach-Chr4 6325180 6327568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00944 119 293 PRT Gene Family AT3G27440 27.528 1.56e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00944 K00855 - qsa:O6P43_033385 757.673