Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00920 ATGGAGAAAACAAGGTCCGATCAGGTTGTTCTCTTCGTTGACCAACGTAACCATAAAGCTCCATCCATGGACACTGAAAGTGATCACCCAACTGCTGCTGCTTATGAGAGGCCTAAACACCCTTTGAGAGTCAAAACCCTTAACCGTCTTAGCTTCGCCAAACCCAAATCCCGCTTGCAAGAATATAACTATGCACCCACCAACAAACTCACGATGTCTGAAGAAACTGACATCCAACCTTCCAATAAATTTTCTTCCTCAGATGAAGATGATGATGAAGAGAAATGGAATGAAGAAGAGATTGAGGAAGATGGTGGAGAGTACGGACACAAGTTGCTCAAAAAGAAGAAGAAGCGTAAGATTCCATGGAGACATGTGGTGGAGTGGGCATTGTTTCTCATCATATTGACTTGCTTGGTTTGCTCTCTGACCATAACTTCCATCAGCAACAAGCTTTTGTGGGGTTTGGAGGTTTGGGAATGGTGTCTGATGATAATGGTCACCTTCAGTGGCCGTTTGGTTTCTGGTTGGCTAATGGCTGTCATTGTCTTCATCATTGAGCGTAATTTCATGCTCAGAGAGAAGGTTCTGTACTTCATCTATGGCGTTAGAAGGAGCGTCAGAAACTGTTTGTGGTTAGCCCTTGTTTTGCTTGCTTATTGGACTCTAATATCAGACGATGTTCAGAAGAAGAACCACAAGATCCTCGACAAGGGTTTTCAAGCGTTAGTGGCAGTCTTGATTGGTGCTATAATCTGGCTGATGAAGATTTTGCTCGTGAAGTTGATAGCTTCGTCGTTCCATGTGACTACCTACTTCGATAGAATGCAAGAAAGCGTTTTCCACCATTACATATTGGATACCTTGTCAGGTCCTCCAATGGAGGAAACAGAAGAAATTCAACACCCTAATCTCTCAGCGTCTAAGTCCCTCCCTGGGACATGGAAAGAAAAGAAATTCGGGTCACGGAGGATTGATATGGAGAAGCTCAGAGAGCTGAGTATGGAGAGCACAGCATCGGCGTGGAGCGTGAAAAGGCTTGTTAACTATGTAAGGTCATCTGGCTTGTCAACCATTTCAAGGACTGTGGATGATTTTGGTAAAGCCGAGTCTGAGATCAACAGCGAGTCGGAAGCCAGGAACTGTGCCCAAAGGATATTCAAGAACGTTGCCAAACCGGGTGCCAAGTATATCGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTCGAGATCCATACCATATTTCCATTCTTTGAAGGTGCCCTTGAAACCGGAAAGATTAGCAGATCTTCACTGAGGAATTGGGTGGTTCGAGCTTATTTTGAACGAAAAGCTCTTGCACAATCCTTGAATGACACTAAAACAGCGGTGCAACAACTTCACAGACTAGCGAGTGCAGTTGTGGTTGTGATAATAATCATCGTGTCCCTGTTAGTGATGGAATGGGCTACCCTCAATATAATACTTGTTTTCATGACACAAATAGTTTTAGTTGGGGTTGCCTTCCAAGGTACCTGCAAGACTGTCTTGGAGGCCATCATCTTTGTCTTTGTCATGCACCCTTTTGATATTGGAGACCGCTGTGTCATTGATGGTGTCCAGATGATTGTGGAGGAGATGAATATCTTGACAACTGTATTTCTTCGATTTGACAATGAGAAAATATACTACCCTAATTCAGTTTTGCTCAGTAAGCCTATAAGCAATTTCTATAGGAGTCCAGAGATGTGGGATATTATTGATTTCACCATTGATGTTTCAACTCCCATGGAGATCATCATTGCGCTCAAGAAATCAATACAAATGTACATTGAGAGCAAGCCAAAGTATTGGAACCCAAAGCACAGCGTGATAGTGAAAGAAATAGAGAACGTAGATAAGCTGAAGCTGTGCTTATCTGTTCAACACACCATTAACCATCAAAACTACGGCGAGCGAAACAATCGTATAACAGAGCTTCTCTTGGAACTGAAAAAGATCTTTGAGACCCATGATGTTAAATACCATGTTCTTCCTCAGGAGCTGCATATTACCAAGATGGTGAACCTTGAAAATGGGAGAGTGCTGTTTCAACCATGAAACAGAAGGGTGTTATGAATCCAAATCTGGGAATGACGATTACCCTTATTGTAT 2136 0.4284 MEKTRSDQVVLFVDQRNHKAPSMDTESDHPTAAAYERPKHPLRVKTLNRLSFAKPKSRLQEYNYAPTNKLTMSEETDIQPSNKFSSSDEDDDEEKWNEEEIEEDGGEYGHKLLKKKKKRKIPWRHVVEWALFLIILTCLVCSLTITSISNKLLWGLEVWEWCLMIMVTFSGRLVSGWLMAVIVFIIERNFMLREKVLYFIYGVRRSVRNCLWLALVLLAYWTLISDDVQKKNHKILDKGFQALVAVLIGAIIWLMKILLVKLIASSFHVTTYFDRMQESVFHHYILDTLSGPPMEETEEIQHPNLSASKSLPGTWKEKKFGSRRIDMEKLRELSMESTASAWSVKRLVNYVRSSGLSTISRTVDDFGKAESEINSESEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPFFEGALETGKISRSSLRNWVVRAYFERKALAQSLNDTKTAVQQLHRLASAVVVVIIIIVSLLVMEWATLNIILVFMTQIVLVGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVQMIVEEMNILTTVFLRFDNEKIYYPNSVLLSKPISNFYRSPEMWDIIDFTIDVSTPMEIIIALKKSIQMYIESKPKYWNPKHSVIVKEIENVDKLKLCLSVQHTINHQNYGERNNRITELLLELKKIFETHDVKYHVLPQELHITKMVNLENGRVLFQP 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00920 693 FunFam Predicted mechanosensitive ion channel 522 571 - -
Bach4g00920 693 SUPERFAMILY Sm-like ribonucleoproteins 513 571 IPR010920 -
Bach4g00920 693 Pfam Mechanosensitive ion channel 467 668 IPR006685 GO:0016020|GO:0055085
Bach4g00920 693 PIRSF Memb_At2g17000 3 689 IPR016688 -
Bach4g00920 693 Gene3D - 522 571 IPR023408 -
Bach4g00920 693 MobiDBLite consensus disorder prediction 64 102 - -
Bach4g00920 693 MobiDBLite consensus disorder prediction 19 40 - -
Bach4g00920 693 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 41 683 IPR016688 -
Bach4g00920 693 MobiDBLite consensus disorder prediction 13 40 - -
Bach4g00920 693 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00920 Bach-Chr4 6170358 6174754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00920 45 680 Mechanosensitive Ion Channel Family AT5G12080 45.400 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00920 K22048 - gmx:100813521 1025.77