Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00917 TCCAGAGGTTAGGGTTTCAAGTTCATACGCTGTATAAGGTTCCCTCACTCTTTACTATCTTGTCACTTCGATACCAAAACAAAACGATTCTATCAAGTTCCTCGCACTTCTTCGCCCTTGGGACTCTCCGATTCTCCTTCGATTCACTTCCTCTAACAATTCGTCAGGTTTTTGATCATAAAGTGCGGGAATGGCTGCTAATCTCACGGAAGGAGCAATAACGTTTATGTGCCGTGATGATTTCTCTTCGGAGGATTTGAAACCGGTGCTCCAAGTAATCGACTTGAAACTTGTGCAAGCCCAGCAGCATAGCGCCACAGAGAGGTATAGACTTGTGCTTTCGGACGGTTCCCATTATCAGCAAGGGATGCTCGCTACTCAGAAGAATGAATTGGTCCATACTGGAAGGTTGCAGAAAGGCTCCGTCGTTAGATTAACACAGTTCATCTGTAACGTTGTCCAGAATCGCAAGATTATTATCATCATTGAGCTGGATGTGGTGCTTGAAAAGTGTGATCTGATTGGGGAACCTACACCAGCACCAAGAACTGTTCCTACGCCATCTTCCACTGGCCAATCAGGAATCACTACTGGAAATCCCCAGTCTATGAGTAACACTTCATCCAGAGCAAGCGTGGCTGGAGCCACTGGGCCATCTCTGGATCCTCCAAAAATGAATCATCCTGCCAATAATGCTTATCCTAGTGGTTCTGACTCTGTAAGATATGGTGCATCAAATGTGGCTCTGACTTTTCCAAAATCAGATTCTGGTGCCACCACACCTAAGCCAATGCCATTCAATGGGTCATATGGTGATCAGAACATCAGTTTTCGCAATCCCCAATCAGAAGCTTCAAGGCCATTGCAGAATACTTTTGCTCGTCCACCACAGGCAATGTATCGACAACCACCACCAGTATACTCAAATAGAGGACCAATAGCGAGAAATGAAGCTGCGCCAAGGATAATTCCAATTGCTGCATTGAATCCATACCAGAATATGTGGACAATCAAGGTTAGAGTAACAGCAAAGGGAGAACTCAGGCACTACAATAATCCCCGAGGTGAAGGAAAAGTGTTTTCTTTTGATCTTCTTGACTCTGAAGGTGGAGAAATTCGGGCAACTTGCTTTAATGCTGTGGCTGACCAGTTCTATTATCAGATTGAAGTTGGTAAAGTCTATCTAATTTCCAAGGGAAGTATAAAGCCAGCTCAAAAGAATTTTAATCACCTTCGTAATGATCAAGAGCTGACCCTTGATATGACATCAGCTATACAGCTATGCCCTGATGATGACAACTCAATTCCAAAGCAACAGTTCCATTTCTGTTCCATTAGTCAAGTGGAAAGTATGGAAAATAACAGTGTTGTAGATGTGATTGGCGTGGTGTCTTCCATTAGTCCTACGGCTTCCATCATGAGAAAAAATGGTACTGAAACTCAGAAAAGAGTCCTTCAGTTGAAAGACATGTCTTGCCGAAGTGTTGAATTAACTTTATGGGGAAATTTTTGCAATGCAGAAGGACAAAGGCTGCAAAGTATGTGTGATTCTGGGGCTTTTCCCATTTTGGCTGTGAAAGCTGCCAGAGTAAATGATTTCAATGGGAAGGCTGTTGGGACCATAACCACTAGTCAGCTATTTATAGACCCTGATTCTCCAGAGGCTTATAGGCTAAAAGAATGGTTTGACAGAGAAGGGAGGAACACTTCAACTGTTTCAATTTCCAGGGAAACATCTAATATTGGCAGTACAAATATACGGAAGACTATATCTCAGATTAAAGATGAGAAATTAGGGACTTCAGAGAACCCTGATTGGATCACTGTCTGTGCAAGTGTTTCATTCATGAAGGTCGATAATTTCTGCTACCCTGCCTGTCCTATTATGATAGGGGATAGGCAATGTAACAAAAAAGTGACCAATAATGGAGATGGGAAATGGCGGTGTGATAGGTGTGATAAGACTGTTGATAATTGTGACTATAGGTATATACTACAACTCCAGATACAGGACCATACAGGCTTAACATGGGTTACTACTTTTCAGGAGTGTGGTGAGGAGATCATGGGTATTCCTGCCAAAGATCTGTATTATTTGAAATATGAAGAACAAGATGATGAGAAATTTGCAGAAATAATCCGTAAGGTTCTCTTCAATAAATATATATTCAAGTTGAAATTAAAGGAGGAGACGTTCAGTGATGAACAGCGTGTAAGGTCAACAGTAGTAAAAGCAGACAAGGTAAACTTCTCATCTGAGTCTAGATTTCTTCTGGACTTGATTGGTAAACTTAAAGCTGATAGGGCAGAAGACCCGAATCATAACTCCGTAATCAATAATGCTGGACTTGGGAATGTTGGAAGTGGACAAACTACTCCACCTGTTTATAATCAGGGGGGTCAGTATGCCAGTAGAGAATATGCGACAACAGTAAATCAAGTTCAATATGGAAACCGATATAATGGTTATTTTCCTTCGGCTGGGGCTTCTGGTTCATCTTGCAACAACTGTGGAGGCTCTGGTCATAGCTCTGCAAATTGCCCAAACATTATGAGACAGGTCAAGCACTCACCAGGAGATTCTGGCCTGTCTGCCGGAGTGCCCTATGCAAACAGGGTATCTGCCGGTTCAAGCAGTGGTGCTGCCCCTGGTGAGTGCTTTAAATGCCATCAAACAGGTCATTGGGCAAGAGATTGTCCTGGTTTTAGTGCAGCTCCTCCGGCTTATGGAAGCGATAGTGGAATGCCAGCAAGCTCTGTATATGGAACCCGGGGTTTGGTCTTTTTTGAAGCCATGGCTGGCATACTTGTGTCAATGGTTATTGACTCCAAACTTCAAAGTCGCGCTTTTGCTTGCAACGTTGGGTCGCTGAAATGGGAGGGCGTCTGCTTAGTCGGATTCGTACAGGTTGCTAGTGCACTGTCGACGGTCTCGGTGTCTGTTCGTGTTTTAGATGAGGCGAGGTGGATGTTGGTGCGAGCTCGACGGGTTATGCGGGTTGTTGGTCCTGGCTTGTGGTTGCTGGTTTGGCATAGCAAGGCTTGCGGCATCGTCGAAGAAGAGAACAAAAATTTCTTGCTCTATTGCTTGTTGCGGTATCATCAGCTCTCTGTTCGTCCCCTTCCCTAA 3130 0.4383 MAANLTEGAITFMCRDDFSSEDLKPVLQVIDLKLVQAQQHSATERYRLVLSDGSHYQQGMLATQKNELVHTGRLQKGSVVRLTQFICNVVQNRKIIIIIELDVVLEKCDLIGEPTPAPRTVPTPSSTGQSGITTGNPQSMSNTSSRASVAGATGPSLDPPKMNHPANNAYPSGSDSVRYGASNVALTFPKSDSGATTPKPMPFNGSYGDQNISFRNPQSEASRPLQNTFARPPQAMYRQPPPVYSNRGPIARNEAAPRIIPIAALNPYQNMWTIKVRVTAKGELRHYNNPRGEGKVFSFDLLDSEGGEIRATCFNAVADQFYYQIEVGKVYLISKGSIKPAQKNFNHLRNDQELTLDMTSAIQLCPDDDNSIPKQQFHFCSISQVESMENNSVVDVIGVVSSISPTASIMRKNGTETQKRVLQLKDMSCRSVELTLWGNFCNAEGQRLQSMCDSGAFPILAVKAARVNDFNGKAVGTITTSQLFIDPDSPEAYRLKEWFDREGRNTSTVSISRETSNIGSTNIRKTISQIKDEKLGTSENPDWITVCASVSFMKVDNFCYPACPIMIGDRQCNKKVTNNGDGKWRCDRCDKTVDNCDYRYILQLQIQDHTGLTWVTTFQECGEEIMGIPAKDLYYLKYEEQDDEKFAEIIRKVLFNKYIFKLKLKEETFSDEQRVRSTVVKADKVNFSSESRFLLDLIGKLKADRAEDPNHNSVINNAGLGNVGSGQTTPPVYNQGGQYASREYATTVNQVQYGNRYNGYFPSAGASGSSCNNCGGSGHSSANCPNIMRQVKHSPGDSGLSAGVPYANRVSAGSSSGAAPGECFKCHQTGHWARDCPGFSAAPPAYGSDSGMPASSVYGTRGLVFFEAMAGILVSMVIDSKLQSRAFACNVGSLKWEGVCLVGFVQVASALSTVSVSVRVLDEARWMLVRARRVMRVVGPGLWLLVWHSKACGIVEEENKNFLLYCLLRYHQLSVRPLP 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00917 979 ProSiteProfiles Zinc finger CCHC-type profile. 771 786 IPR001878 GO:0003676|GO:0008270
Bach4g00917 979 SUPERFAMILY Retrovirus zinc finger-like domains 750 792 IPR036875 GO:0003676|GO:0008270
Bach4g00917 979 Gene3D - 370 509 IPR012340 -
Bach4g00917 979 ProSiteProfiles Zinc finger CCHC-type profile. 823 837 IPR001878 GO:0003676|GO:0008270
Bach4g00917 979 SMART c2hcfinal6 822 838 IPR001878 GO:0003676|GO:0008270
Bach4g00917 979 SMART c2hcfinal6 770 786 IPR001878 GO:0003676|GO:0008270
Bach4g00917 979 PANTHER REPLICATION FACTOR A 1, RFA1 272 689 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bach4g00917 979 FunFam Replication protein A subunit 258 367 - -
Bach4g00917 979 FunFam Replication protein A subunit 371 509 - -
Bach4g00917 979 MobiDBLite consensus disorder prediction 114 175 - -
Bach4g00917 979 Pfam OB-fold nucleic acid binding domain 272 356 IPR004365 GO:0003676
Bach4g00917 979 CDD RPA1_DBD_B 393 500 - -
Bach4g00917 979 SUPERFAMILY Nucleic acid-binding proteins 1 112 IPR012340 -
Bach4g00917 979 Pfam Replication protein A OB domain 382 486 IPR031657 -
Bach4g00917 979 CDD RPA1N 8 104 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bach4g00917 979 FunFam Replication protein A subunit 510 701 - -
Bach4g00917 979 Gene3D - 763 848 - -
Bach4g00917 979 Gene3D - 258 368 IPR012340 -
Bach4g00917 979 NCBIfam replication factor-a protein 1 (rpa1) 233 698 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bach4g00917 979 Gene3D - 510 701 IPR012340 -
Bach4g00917 979 Pfam Zinc knuckle 822 837 IPR001878 GO:0003676|GO:0008270
Bach4g00917 979 Pfam Zinc knuckle 770 786 IPR001878 GO:0003676|GO:0008270
Bach4g00917 979 CDD RPA1_DBD_C 527 700 IPR047192 -
Bach4g00917 979 SUPERFAMILY Nucleic acid-binding proteins 376 506 IPR012340 -
Bach4g00917 979 Pfam Replication factor-A C terminal domain 543 694 IPR013955 -
Bach4g00917 979 CDD RPA1_DBD_A 261 364 - -
Bach4g00917 979 Pfam Replication factor-A protein 1, N-terminal domain 5 105 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bach4g00917 979 SUPERFAMILY Nucleic acid-binding proteins 524 701 IPR012340 -
Bach4g00917 979 MobiDBLite consensus disorder prediction 122 151 - -
Bach4g00917 979 SUPERFAMILY Nucleic acid-binding proteins 259 372 IPR012340 -
Bach4g00917 979 SUPERFAMILY Retrovirus zinc finger-like domains 811 840 IPR036875 GO:0003676|GO:0008270
Bach4g00917 979 Gene3D - 3 117 IPR012340 -
Bach4g00917 979 FunFam Replication protein A subunit 4 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00917 Bach-Chr4 6143404 6149030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00917 1 805 Core DNA Replication Machinery Family AT5G45400 52.254 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00917 K07466 - qsa:O6P43_033421 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00917 4 6143404 6149030 Bach4g00917 4 6143404 6149030 ECH